Gene RPD_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1657 
Symbol 
ID4022137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1868212 
End bp1868718 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID637961852 
Producthypothetical protein 
Protein accessionYP_568795 
Protein GI91976136 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0448276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.877202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTTT TTACCAAAGA CATCAAGACG ATGGACGATC TGTTCGTGCA CCAGCTGCAG 
GACATTTATT ACGCCGAGAA ACAACTCGTG AAGGCGCTGC CGAAGATGGC CGACAAGGCC
ACCGACCCGA TTCTGAAGCA GAGCTTCATG ACCCATCTCG AAGAGACCAA AGGCCATGTG
AAGCGTCTGG AGCAGGTGTT CGAGATGCAC GGCGCGCAGG TGAAGGCGGT GGATTGTCCG
GCGATCGACG GCATCATCGA GGAAGCCGAG GAGACCGCCG GCGAGGTCGA GGACAAGACG
GTGCTGGACG CCGCGCTGAT CAACGCCGCG CAGGCCGCCG AGCACTACGA GATCGTGCGT
TACGGCAGCC TCGTGGCATG GGCGAAGCGG CTCGGCCGCA ACGATTGCGC AGCCGTTCTG
CAGAAGACGC TCGATGAGGA AAAAGCCACC GACAAGAAGC TGACTACGCT GGCCGAAACC
TCGATCAACA TCCGCGCCGC GGGCTGA
 
Protein sequence
MGLFTKDIKT MDDLFVHQLQ DIYYAEKQLV KALPKMADKA TDPILKQSFM THLEETKGHV 
KRLEQVFEMH GAQVKAVDCP AIDGIIEEAE ETAGEVEDKT VLDAALINAA QAAEHYEIVR
YGSLVAWAKR LGRNDCAAVL QKTLDEEKAT DKKLTTLAET SINIRAAG