| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1647 |
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| Symbol | |
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| ID | 4022127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1854824 |
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| End bp | 1855810 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961842 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_568785 |
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| Protein GI | 91976126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.122347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA TTGCGTTCAT CACGGGAATC ACCGGCCAGG ACGGCGCCTA CCTTGCCAGC
CTGCTGCTCG AACAAGGCTA CGCCGTGCAC GGCCTGCTTC GCCGCAGCGC CTCTGCGGAC
GGCATGGTGA GCCGGCTGAA ATGGCTCGGC GTCGCCGACC GCGTGACGCT GCACGACGGC
AATCTGACCG ACCTTTCCAG CCTGATCCGT GTGCTCGGCG ATGTTCGCCC GCACGAGGTC
TACAATCTCG CGGCGCAGTC CTTCGTCAAA TCGTCCTGGC AACAGCCGCT GCTGACCGGC
ACCGTCACCG GCCTCGGCGC CGTCAATGCG CTCGAGGCGG TTCGGACGGC CTGTCCGGAG
GCGCGGTTCT ATCAGGCGTC GTCATCGGAA ATGTTCGGCA TGATCCAGGA GCCGGTGCAG
TCGGAGACCA CGCCGTTCTA TCCGCGCTCG CCTTACGCCG CGGCGAAGCT CTACGCGCAT
TGGATGACGA TCAACTACCG CGAGAGTTTC GGGATGCACG CCTCATGCGG CATCCTGTTC
AACCACGAGT CGCCGCTCCG CGGCATCGAG TTCGTGACCC GCAAGATCAC CGACGGCGTC
GCGCGGATCA AACTCGGCCT CCAGCAGCAG CTCGTGCTCG GCAATCTCGA CGCCAAGCGC
GACTGGGGCC ATGCGCGCGA TTACACCCGG GCGATGTGGC TGATGCTGCA GCAGGACAGA
CCGGACGACT ACGTGATCGC GACCGGCCGC GCCGCGTCGG TCCGCGAATT CTGTGAGATG
GCGTTCGCCT GCGTCGGCCT CGACATGAAC GATCATGTCG TCACCGACCC GCGTTTCTTG
CGGCCGGCCG AGGTCGACGT CCTGAAGGGC GACGCCTCGA AGGCGAAGCA GAAGCTCGGA
TGGCAGTTCG AAACGCCGCT CGAGAGACTG ATCGAGGAAA TGGTCGAGGC CGACCTCGCC
CGGCTGACGG CCGGCGGGCG CGCCTGA
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| Protein sequence | MSKIAFITGI TGQDGAYLAS LLLEQGYAVH GLLRRSASAD GMVSRLKWLG VADRVTLHDG
NLTDLSSLIR VLGDVRPHEV YNLAAQSFVK SSWQQPLLTG TVTGLGAVNA LEAVRTACPE
ARFYQASSSE MFGMIQEPVQ SETTPFYPRS PYAAAKLYAH WMTINYRESF GMHASCGILF
NHESPLRGIE FVTRKITDGV ARIKLGLQQQ LVLGNLDAKR DWGHARDYTR AMWLMLQQDR
PDDYVIATGR AASVREFCEM AFACVGLDMN DHVVTDPRFL RPAEVDVLKG DASKAKQKLG
WQFETPLERL IEEMVEADLA RLTAGGRA
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