Gene RPD_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1643 
Symbol 
ID4022123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1851621 
End bp1851941 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content64% 
IMG OID637961838 
Productferredoxin 
Protein accessionYP_568781 
Protein GI91976122 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TTCACTTTGT TGATCACTCC GGAGAGACCC GCATCGTCGA CGTCGAGAAC 
GGCGCAACGG TGATGGAAGC GGCCATTCGC AACGCCATTC CCGGCATCGA GGCCGAATGC
GGCGGCGCCT GCGCCTGCGC AACCTGCCAC GTCTATGTCG ACGAGGCCTG GCGCGAGAAA
GTCGGCGGCC CGTCGCCGAT GGAAGAGGAC ATGCTCGACT TCGGCTACGA CGTGCGTCCG
TCGTCGCGGC TGTCGTGCCA GATCAAGGTG TCGGACGAAC TCGACGGCCT CGTGATCTCG
ACCCCGGATC GCCAAGCTTA A
 
Protein sequence
MAKIHFVDHS GETRIVDVEN GATVMEAAIR NAIPGIEAEC GGACACATCH VYVDEAWREK 
VGGPSPMEED MLDFGYDVRP SSRLSCQIKV SDELDGLVIS TPDRQA