| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1637 |
|---|
| Symbol | |
|---|
| ID | 4022117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1835781 |
|---|
| End bp | 1836551 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961832 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_568775 |
|---|
| Protein GI | 91976116 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.967279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCCG AAGCAAACGA CCCGATCATC CGGGTCCGCG ACGTCTCCGT GCAGTTCGGC
GCCACCAAGG TGCTGAACAA TCTCGATCTC GACGTCCGTC GCGGCGAGAT CCTCGGCTTC
GTCGGCCCGT CGGGGGCCGG CAAATCGGTG CTGACCCGCA CCATCATCGG GCTGGTGCCG
AAGCTCAGCG GCCAGATCGA GGTGTTCGGC GTCGACCTCG ACGCCGCCGG CAAGGTCGAG
CGCCGCGGCA TCGAGCGGCG CTGGGGCGTG CTGTTCCAGC AGGGCGCGCT GTTCTCGTCG
CTGACGGTGC GCCAGAACAT CCAGTTTCCG GTGCGCGAAT ATCTCAAGCT GTCGCAGCGG
CTGCTCGACG AGATCACCAT CGCCAAGCTG GTGATGGTCG GCCTCAAGCC GGAAGTCATC
GACCGCTACC CGTCGGAGTT GTCGGGCGGC ATGATCAAGC GCGTCGCGCT GGCGCGGGCG
CTGGCGCTGG ATCCGGAGCT GGTGTTTCTC GACGAGCCGA CCTCGGGCCT CGATCCGATC
GGGGCCGGCG ACTTCGACGA ACTGGTGCGC ACGCTGCAGC GCACTTTGGG TCTCACCGTT
TTCATGGTAA CTCATGACCT CGACAGCCTT CATACCGCGT GCGACCGGAT TGCCGTTCTC
GGAGACGGCA AGGTGATTGC GGCCGGATCG ATGGCGGATA TGCAGGCGTC GCAGCATCCG
TGGCTGCGGT CGTACTTTCA TGGCAAGCGC GCGCGCGCGG TGGTCGGCTA G
|
|---|
| Protein sequence | MAPEANDPII RVRDVSVQFG ATKVLNNLDL DVRRGEILGF VGPSGAGKSV LTRTIIGLVP
KLSGQIEVFG VDLDAAGKVE RRGIERRWGV LFQQGALFSS LTVRQNIQFP VREYLKLSQR
LLDEITIAKL VMVGLKPEVI DRYPSELSGG MIKRVALARA LALDPELVFL DEPTSGLDPI
GAGDFDELVR TLQRTLGLTV FMVTHDLDSL HTACDRIAVL GDGKVIAAGS MADMQASQHP
WLRSYFHGKR ARAVVG
|
|---|
| |