Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1622 |
Symbol | |
ID | 4022102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1819019 |
End bp | 1820875 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961817 |
Product | carbamoyltransferase |
Protein accession | YP_568760 |
Protein GI | 91976101 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGTTG CGATATCCGC GGCCGCCGGG CCTTCAGAAA AGTGGTCAAT GTCAAATCAA CACACCTACA TCCTCGGCCT CAACACCTAC GATCACGACG TCAGCGCCGT GCTGTTGCGC GATGGCGAGA TCGCCTTCGG TATCGCGAAG GAACGAATTA CCCGCGAGAA GCACGCCAGC GGCTTCTACA AGGAGGTCAT CGACTATTGC CTGAATGCCG AAGGCATCAC GATGGCCGAT GTCGATCTGG TGGTGCGCAA TTGCTACATC CTGCCGGTGC AGGAGATGGA GGACCGGCTG ATCTATCAGG ACATGCCGGC CTTCCTGCCC GAATATGAGC GCGGCGACGC CGGCACCCAT GCGCTGTTCC GCACCAATTC CAATAAGGTG ATGACGATCT CGCATCACCT CGCGCATGCC TACAGCGCGT TCGCGGTGTC GCCATTCGAT GAAGGCGTGG TGATGGTCGT CGATGGCGTC GGCAGCTATC GCTCCGACGT CGACGAGAGC TTTCCCGGCG ACGAAGCCAG CCCGCTCGCA CGCGAATCCG AGAGCTACTA CAAGTTCAGC GGCAGCAAGC TCGAGTGCCT CAAGAAAATC TGGATGGAAC CGGTGCGCGG TTTCCTCAGC GACGAGTTCT ACAACATGCC CGGGCTCGGC GCGTATTACA GCCGCGCCTC GACCTATGTA TTCGGCGACT GGAACAAATG CGGCGAGCTG ATGGGTCTCG CGCCATACGG CCGCCCCGGC GCCGTGAAAC CGATGCTGCA GATCGAGAAC AATGTTCTGA CGGTGCCGCA TTGGACTCCC GAATTGAACC AGCCCTACAT CATGGACTCG CCCGGCAAGT GGGAGAGCCA CCCCTCGATG CGGCATTGGG AGGACATCGC CTGGCAGGTC CAGGACGACA CCGAACGCGT TCTGCTGGAG CGGGCGCGCT GGCTGCGCGA GACCACCGGC GCGAAGAATC TCTGCATCGC AGGCGGTGTG GCGCTGAACT GCGTCGCCAA CGGCCGGATC GCGCGCGAGA GCGGCTTCGA AAACGTCTGG ATCCAGCCGG CCGCCGGCGA CGACGGTATC GCGATCGGCT GTGCTTACTA CGGCCATCTC GCAGTCCAGC AGAAGCAGCG CTCATTCGAG ATGAAGCACG CCTTCATCGG CCGGGCCTAC ACCGAGGGCG AGGTCGAGGC AGCGACCAAG CGGTTCTTCG TCAAGCCGCA GATCAACATA ATCCGCAGCA ACAGCGTCTA CAAGGAAACC GCCAAGCTGC TCGCAGACCA GAAGGTGATC GGGTGGTTCC AGGGCTCTTC CGAGTTCGGC CCCCGCGCAC TCGGCCATCG CAGCTTGCTC GCCGACCCGC GCAAGGCGGA GATGAAGGAC ATTCTCAACA GTCGTGTGAA GCATCGCCAG CCGTTCCGCC CCTTTGCGCC GATCGTGCTG AAAGAACGCG CCGACGAGAT TTTCGAAGGC ACAGGCGACT CGCCATTCAT GCTGATGGCG AAGCCGGTGG CCGCGGCGTG GCGTGACAAG ATTCCCGCTG TGGTCCACGT CGACGGCACC GCGCGTGTGC AAACGGTGGA CGAAGAGACC GCACCGGACC TCTATTACAT CCTGAAGGAG TTCGAGGCCC TCACCGGCGT GCCGGTGCTT GTGAACACTT CGTTCAACAT CAAGGGCGAG CCGATCGTCG AGACGCCGCG TGACGCGATG GCCTGCTTCC TCACCACCGG CATCGACCAT CTGGTGATGC ACGATACCAT CGTGTCGAAG AACAAGGCGC ACCGCTTCAT CAACCCGGTG CTCGAGGTCT ATTCCGACGT CAGCAATCTG GTGCGATCGG CCACCCGCGC GGGCTGA
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Protein sequence | MPVAISAAAG PSEKWSMSNQ HTYILGLNTY DHDVSAVLLR DGEIAFGIAK ERITREKHAS GFYKEVIDYC LNAEGITMAD VDLVVRNCYI LPVQEMEDRL IYQDMPAFLP EYERGDAGTH ALFRTNSNKV MTISHHLAHA YSAFAVSPFD EGVVMVVDGV GSYRSDVDES FPGDEASPLA RESESYYKFS GSKLECLKKI WMEPVRGFLS DEFYNMPGLG AYYSRASTYV FGDWNKCGEL MGLAPYGRPG AVKPMLQIEN NVLTVPHWTP ELNQPYIMDS PGKWESHPSM RHWEDIAWQV QDDTERVLLE RARWLRETTG AKNLCIAGGV ALNCVANGRI ARESGFENVW IQPAAGDDGI AIGCAYYGHL AVQQKQRSFE MKHAFIGRAY TEGEVEAATK RFFVKPQINI IRSNSVYKET AKLLADQKVI GWFQGSSEFG PRALGHRSLL ADPRKAEMKD ILNSRVKHRQ PFRPFAPIVL KERADEIFEG TGDSPFMLMA KPVAAAWRDK IPAVVHVDGT ARVQTVDEET APDLYYILKE FEALTGVPVL VNTSFNIKGE PIVETPRDAM ACFLTTGIDH LVMHDTIVSK NKAHRFINPV LEVYSDVSNL VRSATRAG
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