| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1610 |
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| Symbol | |
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| ID | 4022090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1804556 |
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| End bp | 1805500 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961805 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_568748 |
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| Protein GI | 91976089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.812323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACA TTCTCATCAT CAAGACTTCC TCGCTCGGCG ACGTGGTGCA TCAGATGCCC
GCGATGACCG ATGCCGCGCG CGCGGTTCCC GGATTGCGGC TGTTCTGGGT GGTCGAGGAA
TCTTTCGCGC CGCTGGCGCA ATTGCATCCG TCGATCGCGG AGGTGATTCC AGTGGCGACG
CGACGCTGGC GATCGAAGCT CGCTTCGCGC GCGACCTGGC GCGAGATCAG CGCGTTCAAT
ACGCGACTGC GCGAGCCGGA TTTCGACAAG GTGATCGACA CGCAGGGGTT GATCCGCTCC
GCGGTGATCG CGCGCCTCGC GCATGGCGAA CGTCACGGCT ACGATGCCGA CAGCATCCGC
GAGCCTCTCG CTGCGCGGTT CTACGGCGTC ACCCACGCCG TAAGCCGCGA CCTCCATGCG
GTGGCGCGCA ATCGCTTGCT CACGGGTCAC GCGCTCGGCT ATCAGCCGCC CGCGAAAATC
GACTACGGCC TGATCCGCCC GCCGCGCGCG GAGGAGAACG GCTACGCCGT GCTACTGCAC
GGCACTTCGC GCGCCTCCAA AGAATGGCGC GCGGAGGACT GGATCGAGAC CGGCCGCTGG
CTGCAGAAGC GCGGAATGCA GGTCGTGCTG CCGTGGGGCA CCGAGGCAGA ACGGCAACTC
GCCGAAATGC TGTCGGGCGC GATCGAAGGC AGCCGCGTGC TGCCGCGGCA GCGCCTCGAT
CTCACCGCGC AGGTGATCGC CAATGCGGCG CTGGTGGTCG GCGTCGACAC CGGTCTGATG
CATCTGGCCG CTGCCTATCG GGTGCCGCTG GTCGGCATCT ATGTCTCGAC CGATCCGGGG
TTGACCGGTC CGGTCGGCAG CGGTCCGATG AGCGTGCTGG GCGGCAAGGC CGGCGCGCCA
TCGGCCCGAC AGGCGATCGA GGCTGCCGAG CGCCTGCTCG ATTAG
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| Protein sequence | MSDILIIKTS SLGDVVHQMP AMTDAARAVP GLRLFWVVEE SFAPLAQLHP SIAEVIPVAT
RRWRSKLASR ATWREISAFN TRLREPDFDK VIDTQGLIRS AVIARLAHGE RHGYDADSIR
EPLAARFYGV THAVSRDLHA VARNRLLTGH ALGYQPPAKI DYGLIRPPRA EENGYAVLLH
GTSRASKEWR AEDWIETGRW LQKRGMQVVL PWGTEAERQL AEMLSGAIEG SRVLPRQRLD
LTAQVIANAA LVVGVDTGLM HLAAAYRVPL VGIYVSTDPG LTGPVGSGPM SVLGGKAGAP
SARQAIEAAE RLLD
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