| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1572 |
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| Symbol | |
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| ID | 4022052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1765326 |
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| End bp | 1765883 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637961767 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_568710 |
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| Protein GI | 91976051 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.418687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTTACTG TCACGCCGTC CGCCATCGAG GCCGTCAAGG TCATCGTTCC AAAGAGCTTT
GCCGATACGC GCGGAACGTT CTGCGAGACT TACAATCACA AGCGATTTGT CGAGCATGGC
ATTTCGTTCG AGTTCGTCCA GGACAACCAA TCCTTTTCGG CGGAGGCGGG TACAATCCGC
GGTCTTCACT TCCAAAGCCC GCCGGCAGCT CAGGACAAGT TGGTTCGCGT CCTGCGTGGC
CGTATCCTGG ATGTCGCTGT CGACTTGCGG CGCTCCTCGC CGACATTCGG TAAATGGGTC
GCCGAAGAAT TGTCCGCGGA GAATGGCAAG CAACTGCTCG TTCCTGTCGG ATTTGCGCAC
GGCTTTTGCA CACTCGAGCC GGATACCCAC GTTCTCTACA AGGTCACGAG CTACTATTCC
CCGGCGCATG ATCTGGGGGT AGCTTGGGAC GATCCGGATC TGGCGATCGA CTGGCCGATC
AGGTCTGACG AGGCGGTTCT GTCCGACAAG GATTTGAGAC AGCCGTCGTT TCGCTCGCTT
GCGCCCGTTT TCGAGTAG
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| Protein sequence | MLTVTPSAIE AVKVIVPKSF ADTRGTFCET YNHKRFVEHG ISFEFVQDNQ SFSAEAGTIR
GLHFQSPPAA QDKLVRVLRG RILDVAVDLR RSSPTFGKWV AEELSAENGK QLLVPVGFAH
GFCTLEPDTH VLYKVTSYYS PAHDLGVAWD DPDLAIDWPI RSDEAVLSDK DLRQPSFRSL
APVFE
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