| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1571 |
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| Symbol | |
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| ID | 4022051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1764242 |
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| End bp | 1765303 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637961766 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_568709 |
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| Protein GI | 91976050 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.285914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA AATTCATGAT TACGGGCGGC GCGGGCTTCA TCGGTTCGGC CGTCGTTCGT
CGACTGATCG AAACCAGCGA TCATGAGGTT CTTGTCGTCG ACAAGCTGAC CTATGCCGGA
AATCTGGAAT CGCTTGCGCC GGTGTCGGCC AGTCCGAAGT TCAGCTTCGA ACGGGTCGAC
ATTACTGATG TCGAGGCCAT GCGCCGGGTC TTCGCGGAGT TTTCGCCCGA CATCGTGATG
CACCTCGCAG CCGAAAGTCA CGTCGACCGA TCGATTGACG GTCCCGGTGA ATTTATCCAG
ACCAACTTGG TCGGGACGTT CGTGTTGTTA CAGGCGGCCT TGAACCATTG GCGTACGCTG
CCGGCTGGTC GCAAGCCTGG TTTTCGCTTC CACCATGTCT CGACCGACGA GGTGTTTGGA
TCGCTTGGAC CGTCCGGCTC TTTCAACGAG GAGACGGCCT ACAGACCGAA TTCGCCCTAT
TCAGCCTCGA AAGCCGGATC CGACCATCTG GTGCGCGCCT GGCATCATAC TTACGGCCTG
CCGATGGTGA TGACCAATTG CTCGAACAAC TATGGTCCCT ATCAGTTTCC GGAGAAGCTG
ATTGCTCTGA TGATCATCAA TGCGCTGGAA GGCAGGCCGC TGCCGGTCTA TGGGACCGGC
GAGAATGTTC GCGACTGGCT TTACGTGGAG GATCATGCCG AGGCGCTGCT GCTCGTTGCC
GAAACCGGAG GCGTTGGCGA AAGCTATAAT ATCGGCGGAG ATAGCGAGCG CACCAACATA
TCGGTCGTTC GCTCGATCTG CCGGATCGTC GATGAGCTCG CGCCCGACGC AGCGATCGGT
CCGCGCGACA AGCTGATCGA ATTTGTGGTC GACCGGCCGG GTCACGATCT GCGTTATGCC
ATCGACGCAA CGAAGATCGA GCGCGAACTA GGTTGGAAGC CGCGCCATAG CTTCGAGACC
GGGTTGCGCC ACACAGTCCA ATGGTATCTC GACAATATGG GCTGGTGGAA ACGGGTCCGC
TCCGGTGCGT ACCGCGGCGA GCGACTCGGC ATCACCGTCT GA
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| Protein sequence | MTKKFMITGG AGFIGSAVVR RLIETSDHEV LVVDKLTYAG NLESLAPVSA SPKFSFERVD
ITDVEAMRRV FAEFSPDIVM HLAAESHVDR SIDGPGEFIQ TNLVGTFVLL QAALNHWRTL
PAGRKPGFRF HHVSTDEVFG SLGPSGSFNE ETAYRPNSPY SASKAGSDHL VRAWHHTYGL
PMVMTNCSNN YGPYQFPEKL IALMIINALE GRPLPVYGTG ENVRDWLYVE DHAEALLLVA
ETGGVGESYN IGGDSERTNI SVVRSICRIV DELAPDAAIG PRDKLIEFVV DRPGHDLRYA
IDATKIEREL GWKPRHSFET GLRHTVQWYL DNMGWWKRVR SGAYRGERLG ITV
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