Gene RPD_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1559 
Symbol 
ID4022039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1738915 
End bp1740324 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content62% 
IMG OID637961754 
ProductATP-binding region, ATPase-like 
Protein accessionYP_568697 
Protein GI91976038 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGC TTCATCGCAT CCGGTCGATT TGGCGCCGCG CGACCTTGCT CCAGCAATTC 
CTGGCCGCTG CAACCGTCAC GATCTGTGTG TCGATGGCCG TCCTGACCTA TTCGGTCTCG
ACCCGGCTTG AGTCGAGCAT AATGCAAGCA GCCGCGGAGG AAGGCGCGTT GTTGGTCGGC
CACTTCATCG GCCCGCACGT GCAGGAATTG GCTTCTTCCG ACGTCTTGTC GCCGCAGAAC
GTCGAAAGGC TCGACGCGAT GCTGCAGACC GTGCTCAACG AGCGCGTCAA GGTCATCAAG
ATCTGGATGA AGGACGGCAG GCTGGTCTAT GCGACCAACA ACAAATTGAT CGGCGAGAAA
TTCCCGTCCG ATCACCTCGA CAAGGCGTTC GGCGGCCGCG TATCAGGCTC GTTCGACGAT
CTCGATGACG ATGAAAACAC TTATGAGCGC GAATTGAAGG TTCCGCTGAT CGAAATCTAT
GCGCCATTCT ATCGAACAGG AACCAGAGAA GTCATCGCGG TCGGAGAGGT CTACAACGAT
GGCTCGCGTC TTCTAGGAGA GTTGTCGCAT ATCCGCACCG TAACTGCAGG CATCGTCGGG
GCGGTCACGG CACCGATGAT GCTGCTTCTG TTCCTGATCG TCCGGCGAGC GAGTGCAATC
GTGGCGGCAC ACGGCGCAGC GTTGTCGCGA AAAGTGGACG AGGCCAAGGC ACTGGCGGAC
CAGAATGATC AATTGCGGCG CGAGGCCGAC GAGGCCCGTC TGGATGCTAT CCAATCCAAC
GAGGGCCTGC TCGGTCAGAT CGGGCAGGAC TTGCATGATG GCCCGATCCA GCTCCTCAGC
ATCCTGACGC TCAAACTGTC GGAGATGAAG CCGGCGGATA GCGGAAGCAC CGCGCTTCCC
ATGGTGACCG GCAGTGCGAC CGGCGGTCTT GCCGACCTCA CCGCGGCCGC ACTGTCCGAT
TTGCGCGACC TCTCTATCGG TCTCGTCTTA CCGCAGTTGG AGGGGCTCAA CGCCCGAGAG
ACGCTTTTGC TGGCCGTGCG TCAGCACGAA GCTCTGACGG GAACGCGTGT CCTCACCGAG
ATCGGCGACC TCACTTTCTT CCCCCCGCCT CCCCTGAGAA CCTGCCTGTT TCGGATCGTT
CAGGAAGGCC TGAACAACGC TTATTACTAC GCCAGCGGAC AGGGCCAGCA CGTGTCGGCG
AGCGGGAGCG CCGGCCAGAT CACGATCGTT GTCCGCGACA GCGGCAGCGC CGATGCACCG
GCGAGTCCCC GCCTACGCAA GACCGGCCTG GGTTTGCCGG GCCTGCACCG AAGGGTCCAA
GGGTTCCGCG GCTCGCTTGA GATCGCACAA TTGTCGCCGG GAACCGAACT TCGGGCAACC
TTGCCGATGG GCGATCCGGC CGGCGGTTAA
 
Protein sequence
MQPLHRIRSI WRRATLLQQF LAAATVTICV SMAVLTYSVS TRLESSIMQA AAEEGALLVG 
HFIGPHVQEL ASSDVLSPQN VERLDAMLQT VLNERVKVIK IWMKDGRLVY ATNNKLIGEK
FPSDHLDKAF GGRVSGSFDD LDDDENTYER ELKVPLIEIY APFYRTGTRE VIAVGEVYND
GSRLLGELSH IRTVTAGIVG AVTAPMMLLL FLIVRRASAI VAAHGAALSR KVDEAKALAD
QNDQLRREAD EARLDAIQSN EGLLGQIGQD LHDGPIQLLS ILTLKLSEMK PADSGSTALP
MVTGSATGGL ADLTAAALSD LRDLSIGLVL PQLEGLNARE TLLLAVRQHE ALTGTRVLTE
IGDLTFFPPP PLRTCLFRIV QEGLNNAYYY ASGQGQHVSA SGSAGQITIV VRDSGSADAP
ASPRLRKTGL GLPGLHRRVQ GFRGSLEIAQ LSPGTELRAT LPMGDPAGG