| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1549 |
|---|
| Symbol | rbcL |
|---|
| ID | 4022029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1726832 |
|---|
| End bp | 1728250 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961744 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_568687 |
|---|
| Protein GI | 91976028 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA GTTATCAGGC GGGAGTGCGG GAATACCGCG AAACCTATTG GGACCCTCAT
TACACGCCGA AGGACAGCGA CATTCTCGCG GTGTTCAAGG TGATCCCGCA GGCCGGGGTG
CCGCGCGAGG AAGCCGCCGC CGCCGTGTGC GCCGAGTCGT CCACCGCGAC CTGGACGACG
GTGTGGACCG ACCTGCTGAC CGACCTCGAT TATTATAAGG GCCGCGCTTA CGCCATCGAA
GACGTGCCCG GCGACGACGA AGCGTTCTAT GCCTTCGTCG CTTATCCGAT GGGCCTGTTC
GAGGAAGGCT CGATCGTCAA CGTCTTCACC TCGCTGGTCG GCAACGTGTT CGGCTTCAAG
GCGGTGCGTG CGCTGCGACT GGAAGACGTG CGCTTCCCGC TGTGGTTCGT CACCACCTGC
GACGGCCCCC CGCACGGCAT TCAGGTCGAG CGCGACAAGC TCGACAAGTA TGGCCGCCCG
ATGCTCGGCT GTACCATCAA GCCGAAGCTC GGCCTCTCTG CCAAGAACTA CGGCCGCGCC
GTGTACGAGT GTCTGCGCGG CGGCCTCGAC TTCACCAAGG ACGACGAGAA CGTCAACTCG
CAGCCGTTCA TGCGCTGGCG CGACCGCTTC GAATTCTGCC AGGAAGCGAT CGAGAAGGCC
GAGCAGGAAA CCGGCGAGCG CAAGGGTCAC TATCTCAACG TCACCGCGCC GAACATGGAG
GAAATCTATC GCCGCGCCGA GTTCGCCAAG GAGATCGGCT CGCCGATCAT CATGAGCGAC
TATCTGACCA TCGGCTGGGC GGCGCATTCC AGCCTTTCGC GCTGGTGCCG CGCCAACGGC
ATGTTGCTGC ACGTCCACCG CGCGATGCAC GGCGTGATCG ACCGCAACCC GCGCCACGGC
ATCAACTTCC GCGTGCTCGC CAAGCTGCTG CGCCTGCTCG GCGGTGACCA TCTGCACTCC
GGCACCGTGG TCGGCAAGCT CGAAGGCGAC CGTGCCGCGA CGCTCGGCTG GGTCGACCTG
ATGCGGGAGC GCCACGTCAA GGAAGACCGC AGCCGCGGCC TGTTCTTCGA TCAGCCGTGG
GGCCACATGG CGCCGGTGAT GCCGGTCGCA TCGGGCGGCA TTCACGTCTG GCACATGCCG
GCGCTGCTCG CGATCTTCGG CGACGACGCG GTGTTCCAGT TCGGTGGCGG TACGCTCGGC
CATCCGTGGG GCAACGCTGC CGGTGCGGCC GCGAACCGCG TCGCGCTCGA AGCCTGCGTG
CGCGCCCGTA ACGAAGGCCG CGATGTGGAG CGCGAGGGCA AGGACATCCT CACCGCCGCC
GCGCAGTCCA GCCCGGAACT GAAGGTGGCG ATGGAAACCT GGCGCGAGAT CAAGTTCGAG
TTCGACGTGG TCGACAAGCT CGACGCGCCG CACCGCTAA
|
|---|
| Protein sequence | MLKSYQAGVR EYRETYWDPH YTPKDSDILA VFKVIPQAGV PREEAAAAVC AESSTATWTT
VWTDLLTDLD YYKGRAYAIE DVPGDDEAFY AFVAYPMGLF EEGSIVNVFT SLVGNVFGFK
AVRALRLEDV RFPLWFVTTC DGPPHGIQVE RDKLDKYGRP MLGCTIKPKL GLSAKNYGRA
VYECLRGGLD FTKDDENVNS QPFMRWRDRF EFCQEAIEKA EQETGERKGH YLNVTAPNME
EIYRRAEFAK EIGSPIIMSD YLTIGWAAHS SLSRWCRANG MLLHVHRAMH GVIDRNPRHG
INFRVLAKLL RLLGGDHLHS GTVVGKLEGD RAATLGWVDL MRERHVKEDR SRGLFFDQPW
GHMAPVMPVA SGGIHVWHMP ALLAIFGDDA VFQFGGGTLG HPWGNAAGAA ANRVALEACV
RARNEGRDVE REGKDILTAA AQSSPELKVA METWREIKFE FDVVDKLDAP HR
|
|---|
| |