Gene RPD_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1548 
Symbol 
ID4022028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1726429 
End bp1726791 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID637961743 
Productribulose-bisphosphate carboxylase 
Protein accessionYP_568686 
Protein GI91976027 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.325289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC CGATAAAGGA CTATCAGTCC CGTATCTCCG ATCCGAACAG CCGCAAGCTC 
GGCACCTTCT CCTATCTGCC GCCGATGGAT GCCGAGCAGC TGCGCAAGCA GATCAACTAC
ATCGTCAACC AGGGCTGGAC GGCGGCGATC GAGCACACCG AGCCGAGCCA TGCCACCGGT
TACTACTGGT ACATGTGGAA GCTGCCGATG TTCGGTGAGA CCGACGTCGA CCGTGTCCTC
ACCGAAATCG AGGCCTGCCG CGCCGCCAAT CCGAACCACC ACGTTCGGCT GATCGGCTAC
GACAACGTCG TCCAGACCCA AGGCACCAGC ATGCTGGTGT ATCGCGCACC GATCGAGGTC
TGA
 
Protein sequence
MTTPIKDYQS RISDPNSRKL GTFSYLPPMD AEQLRKQINY IVNQGWTAAI EHTEPSHATG 
YYWYMWKLPM FGETDVDRVL TEIEACRAAN PNHHVRLIGY DNVVQTQGTS MLVYRAPIEV