Gene RPD_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1547 
Symbol 
ID4022027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1725468 
End bp1726277 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID637961742 
ProductATPase 
Protein accessionYP_568685 
Protein GI91976026 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.591966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TTGACAGCGC CCCCTACAGG ATTGGAGCCC AACCCTATTA TCGCCCGGTC 
GGCAACGAGG TCGACCTCTA CACCGCCGCC TATGCGGCGC GTATGCCGAT GATGCTGAAA
GGTCCGACAG GCTGCGGCAA GTCGCGCTTT GTCGAATACA TGGCCTGGAA GCTGCAGCGT
CCGCTGATCA CGGTGGCCTG CAACGAAGAC ATGACCGCCG CCGATCTGAT CGGCCGCTTC
CTGCTCGATA TCAACGGCAC CACCTGGCGC GACGGCCCGC TCACCTTGGC GGCGCGGATG
GGCGCGATCT GCTATCTCGA CGAAGTGGTC GAAGCCCGTC AGGACACCGT GGTGGTGATC
CACTCTTTGA CCGACCACCG CCGCACGCTG CCGCTGGAAA AGAAGGGCGA AGTGGTCGAA
GCCCATCCCG ACTTCCAGGT GGTGATCAGC TACAACCCCG GTTATCAGAG CCTGACCAAG
GACCTGAAGC CGTCAACCCG GCAGCGCTTC GGCGCCATGG TGTTCGACTT CCCCAATCCC
GATGTCGAGA CCGAGATTGT CGCGCACGAA GCCGGCGTCG ACACCGCCGT CGCCGCCAAG
CTGGTCGAGG TGGCGCAGCG CAGCCGCAAT CTGCGCGGCC ATGGCCTCGA TGAAGGCATC
TCGACCCGTC TCTTGGTCTA TGCCGGCCGG CTGATCGCGA TGGGCATTCC GCCGGCGGAC
GCCTGCCGCA CCGCGCTGGT GCGGCCGCTG ACCGACGATC CCGACATGCA GGACACGCTC
GACGCCGCGG TCGACACCTT CTTCGGGTGA
 
Protein sequence
MSEIDSAPYR IGAQPYYRPV GNEVDLYTAA YAARMPMMLK GPTGCGKSRF VEYMAWKLQR 
PLITVACNED MTAADLIGRF LLDINGTTWR DGPLTLAARM GAICYLDEVV EARQDTVVVI
HSLTDHRRTL PLEKKGEVVE AHPDFQVVIS YNPGYQSLTK DLKPSTRQRF GAMVFDFPNP
DVETEIVAHE AGVDTAVAAK LVEVAQRSRN LRGHGLDEGI STRLLVYAGR LIAMGIPPAD
ACRTALVRPL TDDPDMQDTL DAAVDTFFG