Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1546 |
Symbol | |
ID | 4022026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1723107 |
End bp | 1725428 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961741 |
Product | von Willebrand factor, type A |
Protein accession | YP_568684 |
Protein GI | 91976025 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4548] Nitric oxide reductase activation protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA AGCTCGAAGC ATACCAAGCC GAACTCGACG CCACTGCGCC CGGGCTCTCC GACCTGGTTC AGGCTGTTTA CGCCGACGCG GTCCGGCAAT TGTCGCCGGC CGGGCTCGAA GACCTGTTCG ACGGCGCCTG CGGCCTGGCC CGGCTCGGCA AAGGCAGCGC CGTCGTCGTC GCCTATCTCG ACGCGATGCC GATGGTGGCG CGCGAGTGCG GCGAGGAAGC GATCCGCGAT TGCCGCCTGG CGGTGATGAA GCTTGCCTCG ATGACCTCCG GCGACGTGCT GGCGATGACC TTCGCCAGCC TGCCGGCGGC CGCCAGCCGC TTCAGCGATG CGGAACTGGT GGCCGTCTAT CTGCAACTGC TGCATCGTCT TGCAGCCCGC GTGCCGCGCG GGCTGCGGCC GATGCTCAGC CGTATCGACG AGTTGTTGAA CCGGCTGACG CTGTCGGGGC TGCGCGCCTG GGCCGAATTC GGCGCGGAGG CGCATCAGCG CAATCTCGCG GCGCAGGCCG CGTATTTCGG GCTGGAATCG CAGGACAGCC GCGCGGTGCT GGAGCGCGAG CGCCGCGGCA CCTTGTTTGT CGATGTGCAG CGCCGGCTGT CGGCCTATCT GCGGGCATTC TGGGGCCGCG ACTTCCTGCT GCGGCCGGCG ATCAGCGATC ACGAGGATTT CCGCTGCTTC ATCGAGGACG GCCGGCTGCA TCTGCCGGAC GCCGCCGACG TGCATGGCAC GGTGTCGGGC CTCGATGTCT ATCGCGCCAT GGCCGCGCAT CTGGCGGCGC ATCTGGTCTA TACCGGCCGG CTGCCGGTGG TCGACGGGCT GACGCCGGCC GAACGCTTTC TGATCGGCTT TGTCGAAGAC GCCCGCGTCG AGCGTCTGGC GGTGAAACGC TTCCCCGGCC TGCGCCGGCT GTGGCGCTCG TTGATGCCGA CTGAGGCGAC GCCGCCTCCC AGCCATCCGA CCATCGCCGT GCTGGAGCGC TTTGCGCTGG CGCTGCTTGA TCCGGCCGAG CGCATTGGCG ATGCCAAGCT CGATGCGTTG GCGGCACGTT TCCACGCCGC GCTCGAGCAC GGCGAAAACA TCTCGCTCAA TCTTGGCCGG GCGCTGGCCG ACCATCTGAC CGCGCAGAAG ATCATGCCGA GCCTGCGCTT GCTGGAGCGG ATTCGTCTGC CCTGGCGCGA CGACAACCGC TTTCTGTGGC AGCCGGAACA TTTCGACCGG CTGGAAATGT TCGGCGGCGC CGCGTCCGGC GAAGCGCAGA TTCGCCGCCG GATCGGGCTG ATGGAGTTCA TCAACGAGAC CGATGTCGAA AACGCCGGCG ATGACGCCCA GGAAATCTGG GTGCTCGGCA CCGAGCTGTT CCCCTATGAG GACGAAGGCG TCTCCTACAA TCAGCGCGAG GGCCGGCCGC AAGTGTCGGC GCCGGTGCAC TATCCGGAGT GGGACTACCA GATGCAGGTG GTTCGCCCGA ACTGGGTGAC GCTGCGCGAG CACGCCGCGC CGCGCGCCGC GCCGGTGGTG ATCGACACCA TGCTCGCCGA GCAGAAGGCG GTCGGCCAGC GGGTGCGGCG CATCGTCGAT CAGTTGCGCC CGCAGGGGCT GCAGCGGGTG CGGCGGCTCG AAGACGGCGA GGAGCTTGAT CTTGGCGCCG CGGTCGACGC CATGGTGATG CTGCGTCTTG GTCGCCAGCC GGATGCGCGC ATCACCATGC GCAACGTGAT CCATCGCCGC GATCTGGCGG CGCTGATCCT GATCGATCTG TCGGAATCGA CCAATGAGCC GGTGCATGGC TCGACCCGCT CGGTGATCGA TCTGACCCGC GAAGCCTGCG CGCTGCTGTC CACGGCGATC TCCGGGATCG GCGATCCGTT CGCGATCCAC GGCTTTGCCT CGAACGGGCG CCATGACGTG CGCTATATGC GCTTCAAGGA TTTCGATCAG CGCTTCGACG CCGACGCCAA GTCGAAACTG GCCGGCATGT CCGGCGGGCT ATCGACGCGC ATGGGAGCCG CGATGCGCCA TGCCGGCCGC TATCTGGCGC AGCGCCGCGA AGCGCACCGG CTGCTCTTGG TGATCACCGA CGGCGCGCCG GCCGATGTCG ATGAGCGCGA TCCGCAGCAC CTGCGCATGG ATACCAAGAA GGCGGTCGAA GATTTGCGTA CCGACGGCAT CCGCACCTAT TGCCTCAGCC TCGATCCGCT GGCGGACCGC TATGTCGAAC GGATTTTCGG CGCCGGCGGC TTTGCGGTGA TCGATCACGT TAGCCGCCTG CCGGAACGCT TACCGACCTT GTTCGGCAGC CTGACGCGCT GA
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Protein sequence | MTIKLEAYQA ELDATAPGLS DLVQAVYADA VRQLSPAGLE DLFDGACGLA RLGKGSAVVV AYLDAMPMVA RECGEEAIRD CRLAVMKLAS MTSGDVLAMT FASLPAAASR FSDAELVAVY LQLLHRLAAR VPRGLRPMLS RIDELLNRLT LSGLRAWAEF GAEAHQRNLA AQAAYFGLES QDSRAVLERE RRGTLFVDVQ RRLSAYLRAF WGRDFLLRPA ISDHEDFRCF IEDGRLHLPD AADVHGTVSG LDVYRAMAAH LAAHLVYTGR LPVVDGLTPA ERFLIGFVED ARVERLAVKR FPGLRRLWRS LMPTEATPPP SHPTIAVLER FALALLDPAE RIGDAKLDAL AARFHAALEH GENISLNLGR ALADHLTAQK IMPSLRLLER IRLPWRDDNR FLWQPEHFDR LEMFGGAASG EAQIRRRIGL MEFINETDVE NAGDDAQEIW VLGTELFPYE DEGVSYNQRE GRPQVSAPVH YPEWDYQMQV VRPNWVTLRE HAAPRAAPVV IDTMLAEQKA VGQRVRRIVD QLRPQGLQRV RRLEDGEELD LGAAVDAMVM LRLGRQPDAR ITMRNVIHRR DLAALILIDL SESTNEPVHG STRSVIDLTR EACALLSTAI SGIGDPFAIH GFASNGRHDV RYMRFKDFDQ RFDADAKSKL AGMSGGLSTR MGAAMRHAGR YLAQRREAHR LLLVITDGAP ADVDERDPQH LRMDTKKAVE DLRTDGIRTY CLSLDPLADR YVERIFGAGG FAVIDHVSRL PERLPTLFGS LTR
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