Gene RPD_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1545 
Symbol 
ID4022025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1722244 
End bp1723020 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID637961740 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_568683 
Protein GI91976024 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGAGA ACGTGATCAT CGTCGAAAGG GAAGGGCGGG TCGGGATCGT CACGCTCAAT 
CGGCCTGAAG TCCTCAACGC GCTCAACGAT GAGCTGATGG ATGCGCTCGG CGCCGCGTTG
CTCGCCTTCG ACGCCGACGA CGGCATCGGC GCCATCGTGA TTGCCGGTAC GGCGCGGGCG
TTTGCGGCAG GCGCCGACAT CGCGGGCATG GCGGAATGGA GCTACAGCGA CGTTTACAGT
TCGAACTTCA TCACGCGGAA TTGGGAGACC ATCAAACGGG TCCGCAAGCC GGTGCTGGCG
TCGGTCGCGG GTCTCGCATT CGGCGGCGGA TGCGAATTGG CGTTGGCGTG CGACATCATC
GTCGCCGCGC GCAGCGCGAA GTTTGCGCTT CCGGAGATCA AGCTCGGCCT GCTGCCGGGG
GCAGGCGGCA CGCAGCGCCT ACCGCGCGCC ATTGGCAAGG CCAAGGCGAT GGACATGTGC
CTGTCCGCAC GCCCGCTCGA CGCTGAAGAG GCCGATCGCT ATGGCCTGGT CTCACGTGTG
GTCGACGACG ACAGGCTCCG CGAGGAAACA ATGAAGCTCG CCACGACGAT CGCTTCTTTC
TCAGCTCCGG CATTGATGGC GCTGAAGGAA AGCCTCAATC GCGCTTTTGA AATTCCGCTT
GCGGAGGGAA TCCTGTTCGA ACGGCGCGAA CTGCACGCCC GTTTCGCGAC CGCCGATGCC
CGCGAGGGCA TTCGGGCCTT TCTGGAAAAG CGAAAGCCGA GCTTCGTCCA TCGCTGA
 
Protein sequence
MPENVIIVER EGRVGIVTLN RPEVLNALND ELMDALGAAL LAFDADDGIG AIVIAGTARA 
FAAGADIAGM AEWSYSDVYS SNFITRNWET IKRVRKPVLA SVAGLAFGGG CELALACDII
VAARSAKFAL PEIKLGLLPG AGGTQRLPRA IGKAKAMDMC LSARPLDAEE ADRYGLVSRV
VDDDRLREET MKLATTIASF SAPALMALKE SLNRAFEIPL AEGILFERRE LHARFATADA
REGIRAFLEK RKPSFVHR