| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1542 |
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| Symbol | |
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| ID | 4022022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1718457 |
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| End bp | 1719239 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961737 |
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| Product | naphthoate synthase |
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| Protein accession | YP_568680 |
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| Protein GI | 91976021 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
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| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase)
[TIGR03210] 2-ketocyclohexanecarboxyl-CoA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.04426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG AGGACCTGAT CTACGAAATC CGCAACGGCG TGGCCTGGAT CATCATCAAC
CGGCCCGACA AGATGAACGC GTTCCGCGGC ACCACTTGCG ACGAGCTGAT CAAGGCGCTG
TACAAGGCCG GCTACGACAA GGACGTCGGC TGCATCGTTC TCGCCGGCGC CGGCGACCGC
GCGTTCTGCA CCGGCGGCGA TCAGTCGGCG CATGACGGCA ACTATGATGG CCGCGGCACC
GTCGGCCTGC CGATGGAGGA ACTGCACACC GCGATCCGCG ATGTGCCGAA GCCGGTGATC
GCGCGGGTGC AGGGCTATGC GATCGGCGGC GGCAACGTGC TGGCGACGAT CTGCGACCTG
ACGATCTGTT CGGAAAAGGC GGTCTTCGGC CAGGTCGGCC CGAAGATGGG ATCGGTCGAT
CCCGGCTACG GCACGGCTTT CCTGGCGCGC GTGGTCGGCG AGAAGAAGGC GCGCGAGATC
TGGTACATGT GCCGCCGCTA TTCCGGCAAG GAAGCGGAAG CCATGGGCCT CGCCAATCTC
TGCGTGCCGC ACGAGGAGCT CGACGCCGAA GTGCAGAAAT GGGGCGAGGA GCTGTGCGAA
CGCAGTCCGA CCGCGATCGC CATCGCCAAG CGCAGCTTCA ACATGGACAC CGCGCATCAG
GCCGGCATCG CCGGCATGGG CATGTATGCG CTGAAGCTCT ATTACGACAC CGAGGAATCG
CGCGAGGGCG TCAAGGCGCT GCAGGAGAAG CGGAAGCCTG ATTTCCGCAA ATACGCCAAG
TAG
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| Protein sequence | MKFEDLIYEI RNGVAWIIIN RPDKMNAFRG TTCDELIKAL YKAGYDKDVG CIVLAGAGDR
AFCTGGDQSA HDGNYDGRGT VGLPMEELHT AIRDVPKPVI ARVQGYAIGG GNVLATICDL
TICSEKAVFG QVGPKMGSVD PGYGTAFLAR VVGEKKAREI WYMCRRYSGK EAEAMGLANL
CVPHEELDAE VQKWGEELCE RSPTAIAIAK RSFNMDTAHQ AGIAGMGMYA LKLYYDTEES
REGVKALQEK RKPDFRKYAK
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