| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1532 |
|---|
| Symbol | |
|---|
| ID | 4022012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1707273 |
|---|
| End bp | 1709006 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961727 |
|---|
| Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
|---|
| Protein accession | YP_568670 |
|---|
| Protein GI | 91976011 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC CGCTGCAGCC GACCTCCCTG TCGATCGCCC TGACTGGATC AGGCGGCGCC
GGCGTGATGA CCGCCGGACA GATCCTGCTC GACGCCGCGG CGCATTGCGG GCTCTACGGC
CTGATGACGC GATCGAGCGG ACCACAGATC CGCGGCGGCG AAGCCGCGGC GATGATCCGG
CTCGCCACCC AGCCGGTGCA AACCCCCGGC GACCGCTTCG ACCTGCTGCT CGCGCTCGAC
TTCGAGAATG TCGAACGCTT CGCCGCCGAA CTGCCGCTGG ATTCCGGCAG CCTGATCGTG
GTCGATCCGG CTGCCGGCGA GGTCCCCGCA TTCCTGCGCG CGTCGGGAGC GGCGGTGGCC
AGCGTGCCGA TGGCGAAACT CGCCAAGACG ATAGCCGGCG GCCGCGTCGC GATGATCGCG
CTCGGCATCC TGGCGAAGCT CACCGGCCTT CCCGAATCCT CGATCATCGC CGCGATCGCC
GCCTCGATCG GCCGGAAGAA GCCGGAGGCG ATGGAGGCCA GCGCCAACGC CGTTCGCCTC
GGCGCCAGCG AGGCGCCGGA CGGTGGCGTG GCGCGGCTGG CGCTGCCGGC CGAGCCGCGG
TCGCATCCGC GCTGGTCGAT CACCGGCAAC GAGGCCACCG GCCTCGGCGC CCTGCGCGGC
GGCATCAAAT TCGTCGGCGG CTATCCGATC ACTCCGGCCA CCGAGATTCT CGAATGGATG
GCCGGCGCAT TGCCGCAGTG TGGCGGCGTG CTGATGCAGG CCGAGGATGA GCTGGCCTCG
ATCAACATGA TCGTCGGCGC GAGCTATGGC GGCCTGCCCT CGCTGACGGC GACCGCCGGC
CCCGGCCTGT CGTTGATGAT CGAAACGCTT GGCCTCGCCG TGGCTTCGGA GATCCCGCTT
GTCGTCATCG ATGTGATGCG CTCGGGCCCT TCGACCGGGA TCGCCACCAA GTCGGAGCAG
AGCGACCTGA ACATCGCCGT CTATGGCCTG CATGGCGATG CGCCGCATGT GGTCACCGCG
CCGCTGTCGA TCGCCGATTG CCTGCTGACC GCGCAATGGT CGGTGCATCT GGCTGAAACC
CTGCAGACGC CGGTGATTAT GTTGTCCGAC CAGTCGCTCG GCCAGACCCG GGCGGTGATC
GATCGGCCGG AGGATGTCGA GTTTGCGGGC AAGCGGCTGG TGCTCGAGGG CGATCCGACC
AACTACCAGC GTTACGCGCA GACCGAGTCC GGCGTGTCGC CGATGGCGAT CCCCGGCACG
GCCGGCGGCC AGTACACCGC CGACGGCCTG ACCCACACGC CGCGCGGCGC CCCCTCGAGC
CAGGCCCGCG ACCATGTCGA GCAGATGGAC AAGCGCCAAC GCAAGCTCGA CCGGTTCGAT
TTCGGCGCGC ATTGGGCCGA GATCGACGGC GACGGCGATC TGGCGGTGCT GACCTGGGGG
TCGTCGAGCG GGCCGCTGCG TGAAGCGGTC GCCGCCGCCC GCGCCGCCGG CATCCAGGTC
AGGCTGATCG CCCTGCGGCT GATCTCGCCG ACCCAGCCGG AGCGGCTCGC TGCGGCGTTG
CAGGGCGTCA AACGCGTGCT GGTGATCGAG CAGAACCACG CCGGGCAGTT CTGGCGCTAT
CTGCGCGCCC ACTACGCACT ACCCGACGAC GTCGTGCCGA TTCACTGTCC GGGCCCGCTG
CCGATCCGGC CCGGCGAGGC TCTGGCGCAT ATCCAGCAAG GGGCACTGGC ATGA
|
|---|
| Protein sequence | MSKPLQPTSL SIALTGSGGA GVMTAGQILL DAAAHCGLYG LMTRSSGPQI RGGEAAAMIR
LATQPVQTPG DRFDLLLALD FENVERFAAE LPLDSGSLIV VDPAAGEVPA FLRASGAAVA
SVPMAKLAKT IAGGRVAMIA LGILAKLTGL PESSIIAAIA ASIGRKKPEA MEASANAVRL
GASEAPDGGV ARLALPAEPR SHPRWSITGN EATGLGALRG GIKFVGGYPI TPATEILEWM
AGALPQCGGV LMQAEDELAS INMIVGASYG GLPSLTATAG PGLSLMIETL GLAVASEIPL
VVIDVMRSGP STGIATKSEQ SDLNIAVYGL HGDAPHVVTA PLSIADCLLT AQWSVHLAET
LQTPVIMLSD QSLGQTRAVI DRPEDVEFAG KRLVLEGDPT NYQRYAQTES GVSPMAIPGT
AGGQYTADGL THTPRGAPSS QARDHVEQMD KRQRKLDRFD FGAHWAEIDG DGDLAVLTWG
SSSGPLREAV AAARAAGIQV RLIALRLISP TQPERLAAAL QGVKRVLVIE QNHAGQFWRY
LRAHYALPDD VVPIHCPGPL PIRPGEALAH IQQGALA
|
|---|
| |