Gene RPD_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1525 
Symbol 
ID4022005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1701439 
End bp1701969 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID637961720 
Product(2Fe-2S)-binding 
Protein accessionYP_568663 
Protein GI91976004 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR03193] 4-hydroxybenzoyl-CoA reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.385333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGCG CCGACAGTCT GGCGGCGAGG GAGCGGCCCA TGCATGAACC ACTGCCACGG 
CGACACAAGC GACTGCTACG CCTGCAGGTC AACGGACGCT GGCGCGAGGA CGCGGTCGCC
GACGGCCTGT TGCTGGTCGA TTACTTGCGC GACGTCGTCG GCCTGACCGG GGTCAAGAGC
GGCTGCGATG GCGGCGAATG CGGTGCCTGC ACCGTGCTGA TCGACGGCGA CCCGGTGCCG
TCCTGCATCA CGCTGGCCGT GCGCTGCGAA GACCGCCACG TCGAGACCAT CGAAGGCCTG
GCCGGCAATG GCCGGCTCAA CCGGCTGCAG CAGGCATTCC ACGAGCGGCT TGGCACGCAA
TGCGGCTTCT GTACGCCGGG CATGATCATG GCGGCGGAAG GCTTGTTGCG GCGCAATCCG
TCGCCCACCG AAGCCGAGAT CCGCACGGCG CTGTCCGGCA ATCTGTGCCG GTGCACCGGC
TACGCCAAGA TTCTCGAATC GGTTCAGGCC GCCGCGGACG TAGCGCCATG A
 
Protein sequence
MVGADSLAAR ERPMHEPLPR RHKRLLRLQV NGRWREDAVA DGLLLVDYLR DVVGLTGVKS 
GCDGGECGAC TVLIDGDPVP SCITLAVRCE DRHVETIEGL AGNGRLNRLQ QAFHERLGTQ
CGFCTPGMIM AAEGLLRRNP SPTEAEIRTA LSGNLCRCTG YAKILESVQA AADVAP