| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1520 |
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| Symbol | |
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| ID | 4022000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1694986 |
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| End bp | 1696131 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961715 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_568658 |
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| Protein GI | 91975999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.657552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGGT TTCTGACAAC ATGTCTGGCG GCCGCATTTG GGCTCGGCCT GGCCGTGCAG
GCCAAGGCGG CCGAGCCGAT CAAAATCGGC TCGGTGCTTT CGGTCACCGG CCCGGCCGCC
TTCCTCGGCG ATCCGGAGCT GAAGACCCTG CAGCTCTATG TCGAGAAGAT CAATCAGGAG
GGCGGCCTGC TCGGGCGGCC GGTGCAGCTC ATCCATTACG ATGACGGCTC CGACGCCACG
AAGGCGAATA GTTTCGGCAA GCGCCTGATC GAGGACGACA AGGTCGACGT GCTGATCGGC
GGCACCACCA CCGGCTCGAC GATGTCGATG GCGCCGCTGG TCGATCGCGC CGGAATCCCG
TTTATTTCGC TGGCGGGCGG CGTGGTGATC GTCGAGCCGG TGAAGAAATG GATGTTCAAG
ACGCCGCATA CCGACCGCAT GGCGGCGGAG CGGGTGTTCG GCGACATGAA GAAGCGCAAC
CTGACCAAGG TCGCGCTGTT GTCGGAGACC AGCGGCTTCG GCCAATCCGG CAAGAAGGAG
AGCGAGGCGG CGGCGGCGCG GCTCGGCATC ACGCTGGTCG CCAACGAGAC CTACGGTCCG
AAAGATACCG ACATGAGCCC GCAACTCACC AATATCAGGA GCACGGCGGG GGTGCAGGCG
CTGTTTATTT TCGGCCTCGG TCAGGGACCG GCGATCGCCA ACAAGAACGC CAAGATGCTC
GGGCTGAGCC TTCCGATCTA CCATGCGCAT GGCGTGGCGT CGGAGGAGTT CATCAAGCTG
TCGGATGGCG CCGCCGAGGG CATCCGCCTG CCGGCCGCCG CTCTGCTGGT GGCGAGCAAG
TTGCCGGACA ACGATCCGCA GAAGCCGATC GCGCTCGGCT ACGCCAAGGC CTACACCGAC
CGCTACAAGG AAGAGGTCTC GACCTTCGGC GGCCATGCCT ATGACGCGCT GATGATCATG
GTGTCGGCGA TCAAGCGCGC CGGCGACACC GACAAGAACA AGGTGCGCGA CGCGATCGAG
CAGACCAAGG ACCATATCGG CGCCGACGGC AAGTTCAACA TGTCGCCGAC CGACCATATG
GGCCTCGACC TGTCGGCGTT CCGGATACTG GAAGTCCGGA ACGGCGACTG GGTGCTGGTC
GATTGA
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| Protein sequence | MNRFLTTCLA AAFGLGLAVQ AKAAEPIKIG SVLSVTGPAA FLGDPELKTL QLYVEKINQE
GGLLGRPVQL IHYDDGSDAT KANSFGKRLI EDDKVDVLIG GTTTGSTMSM APLVDRAGIP
FISLAGGVVI VEPVKKWMFK TPHTDRMAAE RVFGDMKKRN LTKVALLSET SGFGQSGKKE
SEAAAARLGI TLVANETYGP KDTDMSPQLT NIRSTAGVQA LFIFGLGQGP AIANKNAKML
GLSLPIYHAH GVASEEFIKL SDGAAEGIRL PAAALLVASK LPDNDPQKPI ALGYAKAYTD
RYKEEVSTFG GHAYDALMIM VSAIKRAGDT DKNKVRDAIE QTKDHIGADG KFNMSPTDHM
GLDLSAFRIL EVRNGDWVLV D
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