Gene RPD_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1512 
Symbol 
ID4021992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1686251 
End bp1687495 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID637961707 
Productpyruvate flavodoxin/ferredoxin oxidoreductase-like 
Protein accessionYP_568650 
Protein GI91975991 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.332762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG CAATCCTGGA GAAGGACCAC GCGGCATCCA ACAAGCCACG CCACATCGTT 
TGCGAAGGCA ACGAGGCGGC GGCGCTGGCG GTGGCGATGG TGCGGCCGGA CATGGTGTCG
GTCTATCCGA TCACGCCGCA GTCGAGCCTG GTCGAACATC TGGCCAAGCT GGTCGCCGAC
GGCCGGATGG ATGCCGAGAT CGTCGACGCC GAGGGCGAGC ACTCGGTGCT CTCGGTGCTG
CAGGGCGCCG CCCTCGCTGG CGGCCGGACG TTTACCGCCA CCTGCGGTCC CGGACTGGCC
TTCATGTTCG AGCCGTATTT CCGGACCTCC GGCCTGCGGC TGCCGATCGT GATGGCGCTG
GTGACGCGCG ACGGCATCAC GCCGCAATCG GTCTGGGGCG GTCATCAGGA TGCGATGACC
GTTCGCGAGG TCGGTTGGGT GCAGATGTAT TGCGAGACGG TGCAGGAGGT GCTCGACACC
ACGATCATGG CGTTCCGCAT CGCCGAACAC CACGACGTCA TGCTGCCGGT CAATATCTGC
CTCGACGGCA ACTATCTGTC CTACGGCGCC GCGCGAGTGA CGCTGCCCGA GCAATCCGAC
GTCGACGCCT TCATGGGCGA CAAGGACGTC AACTGGCACG CCGCGCTCGA TCCGCTCCGG
CCGATGGCGG TCGACCCGCT CACCGGCGGC TCCGGCGGCA AGGGGCCGGC CACCTTCGTG
CGCTATCGCA AGGGCCAGTG CCGCGGCATG CAGAATGCGC TGCGTGTGAT CACCGAGGTG
CACGCGGAAT ATGCCGCCCG GTTCGGCCGC AGCTTCGCGC CGCTGGTCGA GCAATATCGC
ATGGACGACG CCGAGTTCGC GTTGATGACG CTCGGCAGCA TGACCGGCGC CGCCAAGGAT
GCGGTCGACG AGGCGCGCGA CGCCGGCAAG CGCGTCGGCA TCGTCAAGAT CAAGACCTTC
AGTCCGTTTC CGGTCGAGGC GTTGCGGTCG GCGCTATCCG GGATCAAGGC GCTCGGCGTG
GTCGATCGCT CGGTCGGTTT CCGGTGGAAT TGCGGGCCGA TGTATCAGGA GGTGCAGGGC
GTGCTGTACC GGCTCGGCCG CCATGTCCCG GCCGCCAGTT TCATCGGCGG GCTGGCCGGC
GCCGATATCA CGGTCGAGCA TTTCCACCGC GTGATCGACC AGACCGAAGC CCTGCTCACC
GGCGCCGTGC CGAGCGGGCC GGTCTGGATC AACGAGAACG ATTGA
 
Protein sequence
MSTAILEKDH AASNKPRHIV CEGNEAAALA VAMVRPDMVS VYPITPQSSL VEHLAKLVAD 
GRMDAEIVDA EGEHSVLSVL QGAALAGGRT FTATCGPGLA FMFEPYFRTS GLRLPIVMAL
VTRDGITPQS VWGGHQDAMT VREVGWVQMY CETVQEVLDT TIMAFRIAEH HDVMLPVNIC
LDGNYLSYGA ARVTLPEQSD VDAFMGDKDV NWHAALDPLR PMAVDPLTGG SGGKGPATFV
RYRKGQCRGM QNALRVITEV HAEYAARFGR SFAPLVEQYR MDDAEFALMT LGSMTGAAKD
AVDEARDAGK RVGIVKIKTF SPFPVEALRS ALSGIKALGV VDRSVGFRWN CGPMYQEVQG
VLYRLGRHVP AASFIGGLAG ADITVEHFHR VIDQTEALLT GAVPSGPVWI NEND