| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1506 |
|---|
| Symbol | |
|---|
| ID | 4021986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1680216 |
|---|
| End bp | 1680629 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637961701 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_568644 |
|---|
| Protein GI | 91975985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5496] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0703562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCGA CTCTGATCGC TGGCCTATCG GCATCCCATC GGATTGAAAT CGATCCCGCA
CGCAGCATCG ACTTTCTCGG CGAGACGCTA CGCGTCTATG CCACCCCGGA GCTGGTGCGC
GATTTCGAAA CCGTATGCCG CGAGCTGATA CTTGCGCATA CGGATCCAGG AGAGGACTCT
GTCGGCACCG GCATCGCCAT CTCCCACGGC GGCGCGACGC TGTGCGGCAT GCACGTCGAC
ATCACGGTGA CAGTCAGCAA GATCGAAGGC CGCCTCGTGA CCTTCGAGCT CAGGGCGAAC
GACGCGATCG AGGAAATCAG CCGCGGAAGC CACAGTCGAT TTGTCGTCGA GATTGAAAAG
CTGCGAAAGA AAGTGGCCGA GAAGGCCGCG AAGAGCAGAG AGGCACAGGG TTGA
|
|---|
| Protein sequence | MRPTLIAGLS ASHRIEIDPA RSIDFLGETL RVYATPELVR DFETVCRELI LAHTDPGEDS
VGTGIAISHG GATLCGMHVD ITVTVSKIEG RLVTFELRAN DAIEEISRGS HSRFVVEIEK
LRKKVAEKAA KSREAQG
|
|---|
| |