Gene RPD_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1503 
Symbol 
ID4021982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1674859 
End bp1676292 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID637961697 
Productaldehyde dehydrogenase 
Protein accessionYP_568641 
Protein GI91975982 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC CGTTGAGCGG ATTCGGCGGC AACGCCCTGC AGGACAGCTT TCACCGGATG 
CTCGACCGCT CCCGAGCCGA AGCGCCGGCG ACGCTGGAGC AGCGGCTCGA CAGGCTGGCG
CGGCTCCGCA GTGTTCTGAA GGACAATGAA AAGCGATTCG AGCAGGCGAT CTCCGCCGAT
TTCGGCCATC GCTGCGCGAT CGAGACCATG ATCGCCGAGA CGCTCAGCCT GTTGGGCGAC
ATCAAGCACA CCAGCAAGCA CGTCAAATCC TGGATGGCGC CGCGCAAGGT CGCGACCCAG
CCGCAGTTCT GGCCGGGCAA GAACCGGCTG ATCCCGCAGC CGCTCGGCGT GGTCGGCATC
ATCGCGCCGT GGAATTATCC GTTGCAGCTG ACGCTGGCGC CGGCGATCGG CGCGCTGGCC
GCCGGCAACC GGGTGATGAT CAAGCCGAGC GAATTGTCGC CGGCGTTCTC GGCTCTGTTG
CAGGAAACAA TCGCCGCAAA GTTCGACCCC GCCGAGATGA TCGTGACCGG GATCGAGGAC
GGCGTCGCCG AGGCGTTCGC GAAGCTGCCG TTCGACCATC TGATGTTCAC CGGCTCAACG
CGGGTGGGCC GGATCGTCGC AGAAGCCGCC GGGCGTAACC TCACGCCGGT CACGCTCGAG
CTCGGCGGCA AATCCCCGAC CATCGTCGAC CGCTCCGCCG ACCTCGACGA GGTGGCGCCG
CGGATCGCCT ACGCCAAGCT GATGAATGCG GGCCAGACCT GCATCGCGCC GGACTATGTG
CTGGCGCCGC AAGCCGTGGT CGAGGCGCTG GCGGCAAAGA TCCGCGACGC GATGCAGCGG
ATGTTCGGCT CCGATCCCGC CAACAAGGAC TACACCTCGA TTGTCGCCGA CCGGCATTAT
GCGCGGCTGA AGGGCCTCGT CGACGACGCT GCGGCGCGCG GCGCGCGGCT GCTGCAGCCG
GCCGCGGCCG ACGACGCGGC GTGGCAAGGA CAGCGCAAGT TTCCGCCCAC AGTCGTGCTC
GGCGCCACGC CCGACATGAA GATCATGCAG GAAGAGATCT TCGGCCCGCT GTTGCCGATC
CTCGGCTACG AGGATCCGGC CGAGCCGATC GCCTTCATCA ATGCCCGCGA CCGGCCGCTG
GCGCTGTACT GGTTCGGCAA GGACGAGGCG GCGCGCGACG AGGTGCTGGC GCGGACCGTG
TCCGGCGGCG TCACCATCAA CGACTGCCTG GTGCATTTCG CCCAGGTCAA CCAGCCGATG
GGCGGCGTCG GCGCATCGGG AACGGGCTCC TATCACGGCG AATGGGGGTT CAACACCTTC
ACCCAACTCA AGCCGGTGTT CTATCGCTCG CCCTATAACC GCTTCGCCGA TCTGTATCCG
CCCTATGGCG GCAAAATCAC GCGGCTCGCG AAAGTGCTGC GCTGGATTTC CTGA
 
Protein sequence
MDQPLSGFGG NALQDSFHRM LDRSRAEAPA TLEQRLDRLA RLRSVLKDNE KRFEQAISAD 
FGHRCAIETM IAETLSLLGD IKHTSKHVKS WMAPRKVATQ PQFWPGKNRL IPQPLGVVGI
IAPWNYPLQL TLAPAIGALA AGNRVMIKPS ELSPAFSALL QETIAAKFDP AEMIVTGIED
GVAEAFAKLP FDHLMFTGST RVGRIVAEAA GRNLTPVTLE LGGKSPTIVD RSADLDEVAP
RIAYAKLMNA GQTCIAPDYV LAPQAVVEAL AAKIRDAMQR MFGSDPANKD YTSIVADRHY
ARLKGLVDDA AARGARLLQP AAADDAAWQG QRKFPPTVVL GATPDMKIMQ EEIFGPLLPI
LGYEDPAEPI AFINARDRPL ALYWFGKDEA ARDEVLARTV SGGVTINDCL VHFAQVNQPM
GGVGASGTGS YHGEWGFNTF TQLKPVFYRS PYNRFADLYP PYGGKITRLA KVLRWIS