| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1500 |
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| Symbol | |
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| ID | 4021979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1671362 |
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| End bp | 1672144 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961694 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_568638 |
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| Protein GI | 91975979 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGG GAATCAAAGG CCGCCGCGCA CTGGTTTGCG CATCGAGCAA GGGATTGGGA
CGCGCCTGCG CCGCCGCGCT TGCGGCCGAG GGCGTCCATG TCACCATGAC GGCGCGCGGA
GCCGAAGCGC TGGCGCAGGC GGCCGCGGCT TTGCGCCTGG CCTACCCCGA CGTCGAAATC
CTCGAAGTGG CCGGCGATAT CACCACGCCG GAAGGCCGCG AGGCCGCGCT GAAAGCCTGC
CCGGAGCCGG ACATCCTGGT CAACAACGCC GGCGGGCCGC CGCCCGGGGA TTTTCGCAAC
TGGAGCCGCG CCGATTGGAT CAAGGCGCTC GACGCCAACA TGCTGACGCC GATTGAATTG
ATCAAGGCGA CGGTCGACAC GATGATCGCC CGCAAATTCG GACGTATCGT CAACATCACC
TCGGCCGCCG TGAAGGCGCC AATCGATGTG CTCGGCCTGT CCAACGGCGC GCGCACCGGC
CTGACCGGAT TCGTCGCCGG CTTGTCACGC AAGACGGTGC GGCACAACGT GACGATCAAC
GCGCTGCTGC CGGGTCCATT CGACACCGAC CGGCTGCGCG GCGTTTCCGC AGGTCAGGCC
AAGGCGTCGG GCGTCCCCGT CGAGCAGATC CTTCAGACGC GGATGAACGA GAACCCTGCC
GGCCGCTTCG GGGATCCCGA GGAGTTCGGG CTGGCCTGCG CGTTCCTATG CGGCGCACGA
TCGGGCTATA TCACCGGCCA GAACATCCTG CTGGACGGCG GTGCATTTCC CGGCACGCTG
TGA
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| Protein sequence | MDLGIKGRRA LVCASSKGLG RACAAALAAE GVHVTMTARG AEALAQAAAA LRLAYPDVEI
LEVAGDITTP EGREAALKAC PEPDILVNNA GGPPPGDFRN WSRADWIKAL DANMLTPIEL
IKATVDTMIA RKFGRIVNIT SAAVKAPIDV LGLSNGARTG LTGFVAGLSR KTVRHNVTIN
ALLPGPFDTD RLRGVSAGQA KASGVPVEQI LQTRMNENPA GRFGDPEEFG LACAFLCGAR
SGYITGQNIL LDGGAFPGTL
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