| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1491 |
|---|
| Symbol | |
|---|
| ID | 4021970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1659380 |
|---|
| End bp | 1660030 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637961685 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_568629 |
|---|
| Protein GI | 91975970 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGT CCCAGCTTCG TCAAGACATC CTTGACGAGT TCGAGTTCGA TCCGAGCTTC
AACAGCGGGC ACATCAATGT CACTGTTGAA GGCGACGTGG TGATCCTCAC CGGTCACGTC
ATCAGCTACG CCGAGAAACT CGCGGCGATC GCAGCGACGC GTCGCGTCAA AGGTGTGCAT
GCGATCTCCG AGCACATCGA CGTTTGCTAC CCATTCACCA AGACCGCCGA CGACCAGATC
GCGCAGCGCG CATCCGACAT CCTCGACTGG AACATTCTGG TGCCGGCGAA TTCGATCGAG
GTTCAGGTCG AAGACGGATG GCTGACGCTG AGCGGCACCG TTGACTGGTA CTACGAACGA
GCCGCCGCCG AGGACGACGT CCGAAAGCTC GCCGGCGTCG TCGGCGTTAC GAACGATATC
GTCATCAACA ATCCCCTCGG CGACCATTCC TGTATCCGGT CTAAACTCGA ATCCGCACTT
GAGCGCCACG CCGAGATCGC ATCCAAAGGC ATTCGCGTCA CGGTGAAGAA CGGCAACATG
GTCGTTCTGG AGGGCCGCGT CGATACCTGG GACGAACGTC GCGCTGTTCA GAACGCCGCG
TGGTCGACAC CCGGCGTAGC AGCGGTTGAT GACCGTCTGA TGATCAACTG A
|
|---|
| Protein sequence | MSESQLRQDI LDEFEFDPSF NSGHINVTVE GDVVILTGHV ISYAEKLAAI AATRRVKGVH
AISEHIDVCY PFTKTADDQI AQRASDILDW NILVPANSIE VQVEDGWLTL SGTVDWYYER
AAAEDDVRKL AGVVGVTNDI VINNPLGDHS CIRSKLESAL ERHAEIASKG IRVTVKNGNM
VVLEGRVDTW DERRAVQNAA WSTPGVAAVD DRLMIN
|
|---|
| |