Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1487 |
Symbol | |
ID | 4021966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1654589 |
End bp | 1656292 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637961681 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_568625 |
Protein GI | 91975966 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCC TGCTCATACA CCCGAATTAT CATTCCGGTG GCGCCGAGAT CGCCGGCCAC TGGCCCCCGG CGTGGGCGCC GTATCTGGCG GGCGCGCTGA AGACAAACGG GTTCACCGAC ATCAAGTTCG TCGACGCGAT GACGGAGGAT CTTTCGGAAG ATAAGCTCGC CGCGATCATG GCGGAGTACA AGCCCGACCT GGTCGGCGTC ACCTCCATCA CGCCGTCGAT TTACGCGGCC GAGCAGACGC TGAAGACGGC CAAGCAGGTC GATCCGAAGG TCGTCACCAT GCTGGGCGGC GTGCACGCCA CCTTCATGTA TCAACAGGTT CTGACCGAAG CGCCGTGGGT CGACGTGATC GTGCGCGGCG AAGGCGAAGA GATCGTCGTC GAGCTCGCGC GTGCGGTCGA GTCCGGCCAG TGGCAGGCCA ATCGTGCGGA GATCAAGGGT CTCGCTTACA CCGAGGGCAT GAACGGCGAG AGCAAGATCG TCGCCACGCC GGCCGCGCCG ACGGTGAAGG ACCTCGACGC GATCAGCCCG GATTGGGGCA TCCTCGACTG GACCCTTTAC AAATACATCC CGATGAACAC CCGCGTCGCG ATCCCGAACA TGGCGCGCGG CTGTCCGTTC ACCTGTTCGT TCTGTTCGCA GTGGAAATTC TGGCGCGACT ATCGCGTTCG CGACCCGAAG AAGGTGGTCG ACGAGATCGA AGAGCTGGTG AACAAGTATC AAGTCGGCTT CTTCATTCTG GCCGACGAAG AGCCCACCAT CAACCGCAAG AAGTTCATTC AGTTCTGCGA AGAACTGATC GCGCGCGGCC TGAACAAGAA GGTGCAGTGG GGCATCAACA CCCGCGTCAC CGACATTCTG CGCGACGAGC AGCTGCTGAA GTTCTACAAC GAAGCCGGCC TGATGCACGT CTCGCTCGGC ACCGAGGCTG CGGCGCAGCT CAAGCTCGAC CTGTTCAACA AAGAGACCAA GATCTCCGAC AATAAAAAGG CGATCCGCCT GCTGCGCGAA GCCGGCATCG TCGTGGAAGC CCAGTTCATC GTCGGCCTCG ACAGCGAAAC CCCGGAGACG CTGGAAGAAA CCTATCGCAT GGCGATGGAC TGGAAGCCGG ATCTCGCCAA CTGGTCGATG TACACGCCGT GGCCGTTCAC GCCGCTGTTC AAGGAACTGA GCGACAAGGT CGAGGTGTTC GACTTCGCCA AATACAACTT CGTCACGCCG ATCGTGAAAC CGGCGGCGAT GGAGCGCGGC GAACTGCTCG ACCGGGTGAT GAACAATTAT CGCCGGTTCT ACATGTACAA GGCGTTCTTC TCCTACCCAT GGTCCGGCAC CGGACGACGA CGACGTTACC TGCTGGGCTG CCTCAAGGCG TTCCTGAAGG CCGGATTCGA GCGAAAGTTC TACGATCTGG GCCGGGTCGG CTATTGGGGG CCGCAGTCGA AGAAGAAGGT CGACTTCCAC TTCGACACGA CCCGCACGAT CGCCGACGCG CAGACCTCAG ACTGGGAAGC CAACGCCGAT CGTTCGCGAA AGTCGGCGGC CTCGCAGATG GCCATCGTCT CGGCCTGCGG TGGCGGCTCC GAGCAGATGT CGGAACCGAG CAATTGTGAA GTCGCCAAGG AAGCATTGGC GGAGACCGTA ACCAGCCGCA TGGTGGACAA CGCCAATGAA GCAGGTTCGC ACACCCGCCA CTGA
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Protein sequence | MRILLIHPNY HSGGAEIAGH WPPAWAPYLA GALKTNGFTD IKFVDAMTED LSEDKLAAIM AEYKPDLVGV TSITPSIYAA EQTLKTAKQV DPKVVTMLGG VHATFMYQQV LTEAPWVDVI VRGEGEEIVV ELARAVESGQ WQANRAEIKG LAYTEGMNGE SKIVATPAAP TVKDLDAISP DWGILDWTLY KYIPMNTRVA IPNMARGCPF TCSFCSQWKF WRDYRVRDPK KVVDEIEELV NKYQVGFFIL ADEEPTINRK KFIQFCEELI ARGLNKKVQW GINTRVTDIL RDEQLLKFYN EAGLMHVSLG TEAAAQLKLD LFNKETKISD NKKAIRLLRE AGIVVEAQFI VGLDSETPET LEETYRMAMD WKPDLANWSM YTPWPFTPLF KELSDKVEVF DFAKYNFVTP IVKPAAMERG ELLDRVMNNY RRFYMYKAFF SYPWSGTGRR RRYLLGCLKA FLKAGFERKF YDLGRVGYWG PQSKKKVDFH FDTTRTIADA QTSDWEANAD RSRKSAASQM AIVSACGGGS EQMSEPSNCE VAKEALAETV TSRMVDNANE AGSHTRH
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