| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1485 |
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| Symbol | |
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| ID | 4021964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1652530 |
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| End bp | 1653879 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961679 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_568623 |
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| Protein GI | 91975964 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0666165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG CCCTCGACAA ATACGCCAAG AGCTCGGTGC CGCGTTACAC CAGCTACCCG
ACCGCGCCGC ACTTCGCCAA CGAGTTTCCG GAATCCGTCT ATCGCGGCTG GCTTGCCCAG
CTCGACACCG ACGAGCCGAT CTCGCTGTAT CTGCACGTGC CGTTCTGCAA GCAGATGTGC
TGGTACTGCG GCTGCAACAT GAAGCTCGCG TCGAAATACG GGCCAGTCGC CGACTATGTC
GAGAGCCTGA TCGACGAAAT CGATCTGGTC GCCGACGCGA TGCCCGGAAC CCTGCCGGTG
CGCCATCTGC ATTTCGGCGG CGGCACTCCG ACCGTCATTG AGCCCGAGGA CCTCGGCGCG
ATCATGACAC TGCTGCGGGA ACGCTTCGAG TTTGTCTCCG ACGCCGAAGT TGCGATCGAA
AGCGATCCGC GCACCCTGAC CGACGAGATG GCCGCGAAGA TCGGCGAGCT CGGCTTCACC
CGCGCGAGCT TCGGCGTCCA GGAGTTCGAC CCGAAAGTCC AGGCGGCGAT CAACCGTATC
CAGCCGCCGG AGATGGTCGC CCATGCGATG GCCCGGTTCA AGGCGGCGGG CGTGCAACGG
ATCAATTTCG ATCTGATCTA CGGCCTGCCC TATCAAACCG CCGAAGACCT GCGCAGCACT
GTCGAGCAGT GCGTCGAAAT GAAACCGGAC CGGGTCGCGC TGTTCGGCTA CGCGCATGTG
CCGTGGGTCG CCAAGAACCA GCGGATGATT CCCGACGACT CCCTGCCCAA GTCGGATTTG
CGCTCCGAGC AAGCCGACGC CGCGGCGGAC GCGCTGGTCA AGGGCGGCTA CGTCCGGATC
GGGATCGATC ACTTTGCGCT GCCCAATGAT TCTCTGGCGA TCGCCGCGAA GACCGGCGAG
TTGCACCGCA ATTTTCAAGG CTACACCAGC GACGCCGCAC AGACCCTGAT CGGGATCGGC
TCGACCTCCA TCGGCCGTAC GCCGAGCGGC TATCTGCAGA ACATCAGCGA AACCGGCGCC
TGGGCGCGCG CCGTTGCGGC CGGCAAGCTG CCGGTCGCGC GCGGCCACAC GCTCACCCAG
CAGGACAATC TGCGGGCGCA TGTGATCGAG CGGATCATGT GTGACGGCAA GATCGATCTC
GCCGCGGCAG GTCGCGCCTT CGGCTATGCC GATGATTGGT ATGCGCCGGA AGAGGAAGCG
CTTGCCGACC TTCAGCGCGA TGGCGCCGTG GTCTGCGATC ATGGCAAGCT GACGCTGACG
CCGGAAGGTA TCCGGCTATC GCGCGTGGTT GCCTCGGTTT TCGACACCTA CCTGCGCAAT
TCGTCGGTCC GGCATTCGGT CGCCGTCTAA
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| Protein sequence | MSSALDKYAK SSVPRYTSYP TAPHFANEFP ESVYRGWLAQ LDTDEPISLY LHVPFCKQMC
WYCGCNMKLA SKYGPVADYV ESLIDEIDLV ADAMPGTLPV RHLHFGGGTP TVIEPEDLGA
IMTLLRERFE FVSDAEVAIE SDPRTLTDEM AAKIGELGFT RASFGVQEFD PKVQAAINRI
QPPEMVAHAM ARFKAAGVQR INFDLIYGLP YQTAEDLRST VEQCVEMKPD RVALFGYAHV
PWVAKNQRMI PDDSLPKSDL RSEQADAAAD ALVKGGYVRI GIDHFALPND SLAIAAKTGE
LHRNFQGYTS DAAQTLIGIG STSIGRTPSG YLQNISETGA WARAVAAGKL PVARGHTLTQ
QDNLRAHVIE RIMCDGKIDL AAAGRAFGYA DDWYAPEEEA LADLQRDGAV VCDHGKLTLT
PEGIRLSRVV ASVFDTYLRN SSVRHSVAV
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