Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1480 |
Symbol | |
ID | 4021959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1647469 |
End bp | 1649904 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961674 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_568618 |
Protein GI | 91975959 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG2217] Cation transport ATPase [COG3350] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGCA TAGAGCAAGC GAGCAACGGC TCTCCTGGTG AAAAATCAAA TTGTTGTTCC GGCAAAGCGA GCGACACCGC TCAGCAAGCC GCAGTTTCGT CCTGCTGCGG TGGCGACCAT GAAGCCCCCT CACCTGCGGT CGCGAAGGTG ATCGATCCGG TCTGCGGCAT GAGCGTTGAC CCGGCCACCA GCCAGCACCG TTTCGCGTAT CGCGGGATCA CGCACCATTT CTGCAGCGAC GGTTGTCTGA CGAAGTTTGG CGCCGATCCC GTTTCCTATC TCGACAAGTC GAAGGCGAAG CCGGCGCCGG TGGTGCCGGA GGGGACGATC TACACCTGCC CGATGGATCC GCAGATCCGT CAGGTCGGCC CGGGGAATTG CCCGATCTGT GGCATGGCGC TGGAGCCGGA ACTCGTGTCG CTCGATGCGC CACCGAACGC CGAACTGATC GACATGACCC GCCGGTTCTG GATCGGGCTC GCACTGGCGC TGCCCACGGT GGTTCTGGAA ATGGGCGGCC ACCTCGTCGG CGGCCACGGC CTGATCGATC CGACATTGTC GAACTGGATC CAGCTCGCAT CCGCAACGCC CGTGGTGCTG TGGGCAGGCT GGCCGTTCTT CGTGCGCGGC TGGCAGTCGC TGGTTACGCG CAACCTCAAC ATGTTCACGC TGGTCGCGAT GGGAACAGGC GTCGCCTATG TCTACAGTCT GGTAGCAACG CTGGCGCCGC AACTGTTTCC TCCAGCGCTC CGGAACCATG GCGGCGCCGT GCCGGTGTAT TTCGAAGCCG CCGCGGTCAT CACCGTGCTG GTGCTGCTCG GCCAGGTGTT GGAGCTGCGC GCCCGCGAGG CGACCTCCGG CGCGATCAAG GCGCTTCTCG ACCTCGCGCC GAAGACCGCG CGGCGGATCG AGGCGGACGG CGCCGAGCAG GACGTCGAAA TCGCCAGCCT CGCTGTTGGC GACAAGCTTC GCGTCCGTCC CGGCGAGAAG GTGCCGGTCG ACGGCGTGAT CCTCGAAGGC CGCTCGTCGC TGGATGAATC GCTGCTGACC GGCGAATCGA TGCCGGTCAC ACGCGAGGCC GGCGGCAAGG TGGTCGCCGG CGCGCTGAAT CAGTCCGGCG GCTTCGTGAT GCGCGCCGAT CAGATCGGCC GGGACACGAT GCTGTCGCGG ATCGTGCAGA TGGTCGCGCA GGCGCAGCGG TCGCGCGCGC CGATCCAGCG TATCGCCGAC CTCGTCGCCG GCTGGTTCGT GCCGGCCGTG GTACTGGCCG CACTTGCGTC TTTCGCCGCC TGGGCGACGT TCGGCCCCGA GCCGCGGCTG ACTTTCGCAT TGGTCGCCGC CGTGAGCGTG CTGATCATCG CCTGCCCCTG TGCGCTCGGC CTTGCAACGC CGATGTCGAT CATGGTCGGC GTCGGTCGCG GCGCCCAGGC CGGCGTCTTG ATCCGCAATG CCGAAGCACT CGAGCGGATG GAAAAGGTCG ATACGCTGGT GATCGACAAG ACCGGCACGC TGACCGAGGG CAAGCCCAAG GTGACCAAGA TCGTCGCCGC GGCCGGCTTC GATGAGACCG ACCTGCTGCG GCTTGCAGCC AGCGTCGAGC GCGCCAGCGA GCACCCGCTC GCCCATGCGA TCATCGCCGA GGCCAAGGAT CGCAACATCG AGCTCGTTCC GGTCGAAGCA TTCGATGCCC CGACCGGCAA AGGCGCGACC GGCAAGGTCG CAGGCAGAAC ATTGGTGATC GGCAACGCCG CCTACCTCGC CTCGCTCGAC ATCGACACAA AAGAGCTGCG CGACCAGTCC GAGCAACTGC GCGCTGACGG CGCCACCGTC GTCAGCGTCG CGATCGACGG CCGGCTCGCA GGTCTGTTCG CCGTCGCCGA CCCGGTCAAG GCTTCGACGC CCGAGGCGTT GAAGGCGCTC GCCGCTGACG GCCTCGCGGT GATCATGCTG ACCGGCGACA ACCGCACGAC GGCGAACGCC ATCGCGCGGA AACTCGGCAT CGCCAATGTC GAAGCCGAAG TGCTGCCGGA ACAGAAGAAC GCGGTCGTGG AAAATCTGCG CAAGCAAGGA CGCGTCGTTG CGATGGCCGG GGACGGCGTC AACGACGCCC CTGCGCTGGC CGCGGCCGAC GTCGGCATTG CAATGGGGAC CGGCACGGAC GTCGCGATGG AAAGCGCCGG CATCACGCTG CTGAAAGGCG ACCTGCGCGG GATCGTCCGC GCGCGACATC TGTCGCGGGC GACGATGCGC AATATCAGGC AGAATCTGTT CTTTGCCTTC ATCTACAATG CGGCGGGCAT CCCGATCGCG GCCGGCGTCC TGTATCCGAG CTTCGGCCTG CTGCTGTCGC CGATCATTGC AGCGGCGGCG ATGTCGCTGT CGTCGGTGAG TGTGATCGGC AATGCGCTGC GGCTGCGCAC CGCCCGATTG GAGTGA
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Protein sequence | MRSIEQASNG SPGEKSNCCS GKASDTAQQA AVSSCCGGDH EAPSPAVAKV IDPVCGMSVD PATSQHRFAY RGITHHFCSD GCLTKFGADP VSYLDKSKAK PAPVVPEGTI YTCPMDPQIR QVGPGNCPIC GMALEPELVS LDAPPNAELI DMTRRFWIGL ALALPTVVLE MGGHLVGGHG LIDPTLSNWI QLASATPVVL WAGWPFFVRG WQSLVTRNLN MFTLVAMGTG VAYVYSLVAT LAPQLFPPAL RNHGGAVPVY FEAAAVITVL VLLGQVLELR AREATSGAIK ALLDLAPKTA RRIEADGAEQ DVEIASLAVG DKLRVRPGEK VPVDGVILEG RSSLDESLLT GESMPVTREA GGKVVAGALN QSGGFVMRAD QIGRDTMLSR IVQMVAQAQR SRAPIQRIAD LVAGWFVPAV VLAALASFAA WATFGPEPRL TFALVAAVSV LIIACPCALG LATPMSIMVG VGRGAQAGVL IRNAEALERM EKVDTLVIDK TGTLTEGKPK VTKIVAAAGF DETDLLRLAA SVERASEHPL AHAIIAEAKD RNIELVPVEA FDAPTGKGAT GKVAGRTLVI GNAAYLASLD IDTKELRDQS EQLRADGATV VSVAIDGRLA GLFAVADPVK ASTPEALKAL AADGLAVIML TGDNRTTANA IARKLGIANV EAEVLPEQKN AVVENLRKQG RVVAMAGDGV NDAPALAAAD VGIAMGTGTD VAMESAGITL LKGDLRGIVR ARHLSRATMR NIRQNLFFAF IYNAAGIPIA AGVLYPSFGL LLSPIIAAAA MSLSSVSVIG NALRLRTARL E
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