Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1473 |
Symbol | |
ID | 4021952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1641660 |
End bp | 1642880 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961667 |
Product | putative urea/short-chain binding protein of ABC transporter |
Protein accession | YP_568611 |
Protein GI | 91975952 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.267716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCCA AGCCTCTCGC GGCGGCGATG ATGACGGCTG CGCTTATGTC ATCCTCGACC GCATTCGCCC AGGTATCCGA CGACATTGTC AAGATCGGTG TACTGACCGA TATGAACGGT CCCGCGTCGA CGCCGACCGG CCAGGGTTCG ATGACGGCCG CGCAAATGGC GATCGACGAT TTCGGCGGCC AGGTGCTGGG CAAGCCGATC AGCGTCATCG TCGGCGACCA CCAGCTCAAG CCCGACATCG GCGGCGCTCT GGCGCGGCGC TGGTACGACG TCGAACAGGT CGACCTGATC GTCGACGTGC CGGTCTCCGC GGTCGGTCTC GCGGTTCAGA ACATCGCCAA CGAAAAGAAG CGGATGTTCA TCACGCAATC GACCGGCGCC GCCGATTTTC ACGGCAAGTT CTGCAGCCCC TACACGATGC AATGGGTGTT CGACACCCGG GCGCTGGCGG TCGGCACCGC GCAGGAGGTC GTGAAACGCG GCGGCGACAC CTGGTTCTTC ATCACCGACG ACTACGCCTT CGGCCTGTCG CTGGAGCGCG ACGCCGCGGC GGTGGTGACC AAGGCCGGCG GCAAGGTGAT CGGCTCGGTG CGTCCGCCGT TCGCGACGCC GGACCTGTCG TCCTTCGTAC TTCAGGCGCA AGCCTCGAAG GCCAAGATCA TCGGCATCGC CGGCGGCCCG CCGAACAACA TCAATGAAAT AAAGACCGGC GCCGAGTTCG GCGTCTTCAA GGGCGGACAA CAGATGGCGG CGCTGCTGGC GTTGATCACC GACATCCATT CGCTCGGCCT GCCCGCCGCG CAGGGCCTGT TACTGACGAC GTCGTTCTAT TGGGACATGG ACGACAGGAC CCGCGAATGG TCGAAGCGCT ACTTCGCCAA GATGAACCGG ATGCCGACGA TGTGGCAGGC CGGCGTGTAT TCCGCGGTGA CACACTATCT GCAAGGCATC AAGGAGGCCG GCACCGACGA GCCGCTCAAG GTCGCCGCCA AGATGCGCGA GAAGCCGATC GAGGATTTCT TCTCGCGCAA TGGCAAACTG CGCGAGGACG GTCTGATGGT GCATGACTTG ATGCTGGTTC AGGTCAAGAG CCCGGAGGAG TCGAAATATC CGTGGGACTA TTACAAGATC CTCGCGCATA TCTCCGGTGA AGAAGCGTTC GGCCCGCCCG ACCCGGCCTG CCCGTTGATC AAGAAACAGG CGGCGAATTG A
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Protein sequence | MFAKPLAAAM MTAALMSSST AFAQVSDDIV KIGVLTDMNG PASTPTGQGS MTAAQMAIDD FGGQVLGKPI SVIVGDHQLK PDIGGALARR WYDVEQVDLI VDVPVSAVGL AVQNIANEKK RMFITQSTGA ADFHGKFCSP YTMQWVFDTR ALAVGTAQEV VKRGGDTWFF ITDDYAFGLS LERDAAAVVT KAGGKVIGSV RPPFATPDLS SFVLQAQASK AKIIGIAGGP PNNINEIKTG AEFGVFKGGQ QMAALLALIT DIHSLGLPAA QGLLLTTSFY WDMDDRTREW SKRYFAKMNR MPTMWQAGVY SAVTHYLQGI KEAGTDEPLK VAAKMREKPI EDFFSRNGKL REDGLMVHDL MLVQVKSPEE SKYPWDYYKI LAHISGEEAF GPPDPACPLI KKQAAN
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