| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1471 |
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| Symbol | |
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| ID | 4021950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1640137 |
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| End bp | 1640835 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961665 |
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| Product | ABC transporter related |
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| Protein accession | YP_568609 |
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| Protein GI | 91975950 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.827608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAG TCCTGCGCCT CGACGGCATC CGCAAGTCCT ACAATGTCGG CACCCCGGTC
GAGACCGAGG TGCTGCACGG CATCGACCTC ACCCTGCACG CACGCGACTT TCTGGCGCTG
ATGGGGCCGT CGGGCTCGGG CAAGTCGACG CTGCTCAACA TCATCGGCCT GCTCGACCGG
CCGACCGCCG GGCGGCTTCT GATCAACGGC GTGGACGCGG GACAACTCGG CGATGCGGCG
CTGACGCAGC TGCGCGGCCG CGCGATCGGC TTCGTATTTC AGTATCACTA TCTGATCTCG
GCCTTCACCG CGCGCGAGAA CGTGATGATG CCGATGCTGG TCGATCGCGG CCGCCCGGAC
GGGGAGATGG AGCGCCGCGC CGACGAATTA CTCGATCGCG TCGGTCTGAG CCGCTGGCGC
AACAACAACG CCGCCAACAT GTCCGGCGGC CAGCAGCAGC GCGTCGCCAT CGCCCGCGCG
TTGGCGATGA ATCCCGACCT CGTGCTCGCC GACGAGCCGA CCGGCAATCT CGACACCAAA
TCGGCCAATG ACGTGTTCGA ACTGATGCGC GAGATCAACC GCGAACGCGG CACCACGTTT
CTACTGGTCA CCCACAACGA CGACCTCGCC AAAAGCTGCG ACCGGATCGT CCAGGTGGTC
GACGGGCGGA TCGCGGTGTC GGGCGTGAGT TTGCCTTAG
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| Protein sequence | MAEVLRLDGI RKSYNVGTPV ETEVLHGIDL TLHARDFLAL MGPSGSGKST LLNIIGLLDR
PTAGRLLING VDAGQLGDAA LTQLRGRAIG FVFQYHYLIS AFTARENVMM PMLVDRGRPD
GEMERRADEL LDRVGLSRWR NNNAANMSGG QQQRVAIARA LAMNPDLVLA DEPTGNLDTK
SANDVFELMR EINRERGTTF LLVTHNDDLA KSCDRIVQVV DGRIAVSGVS LP
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