Gene RPD_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1454 
Symbol 
ID4021932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1624587 
End bp1625069 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637961647 
ProductAsnC family transcriptional regulator 
Protein accessionYP_568592 
Protein GI91975933 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAAGA GCCTCGATCA GATCGATCTC AAGATCCTTC AGGAAATTCA GGATGACGGC 
CGGATCACCA ATGTCGAATT GGCGAAGCGG GTCGGTATCT CGCCGCCGCC CTGTCTGCGC
CGGGTTCGGA CGCTGGAAGA AGAGGGCTAT ATCAAGGGTT ATCGGGGGCT GCTCGATCCC
GCGCAGCTCG GTTTCGACGT CACCGTGTTC GCGTCGGTCC ATCTGTCGAG CCAGGCGGAA
GCCGACCTGC GCGGCTTCGA GGCGTTCGTT CGCGCCGAAC CCCTGGTCCG GGAATGCTGG
ATGCTGTCGG GCGAGGTCGA CTTCATCCTC AAATGCGTCG CGCCGGATAT GGCGACATTC
CAGAACTTCG TCGCGCACCT GACAGCGGCG CCGCACGTGC GGAACGTGCG GACGTCACTC
GTGCTGCGGA ATTCGAAATA CGCAGCGGCC GTACCGCTCG AGCTGAAGTC GGCGGCGACC
TGA
 
Protein sequence
MSKSLDQIDL KILQEIQDDG RITNVELAKR VGISPPPCLR RVRTLEEEGY IKGYRGLLDP 
AQLGFDVTVF ASVHLSSQAE ADLRGFEAFV RAEPLVRECW MLSGEVDFIL KCVAPDMATF
QNFVAHLTAA PHVRNVRTSL VLRNSKYAAA VPLELKSAAT