Gene RPD_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1449 
Symbol 
ID4021926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1619716 
End bp1620147 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637961641 
Productphasin 2 
Protein accessionYP_568587 
Protein GI91975928 
COG category[S] Function unknown 
COG ID[COG5490] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01841] phasin family protein
[TIGR01985] phasin 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT CGAGCGATCC GTTTTCCACC GTCCTGCCGT TCCAGCTGCC CGAGCAGGTC 
CGCGCATTTG CCGAAAAGGG CGTGTCCCAA GCACGCGACA GCTACAGCAA GTTGCGGGAT
GTAGCCGAGA CCAACAACGG CACCATCGAG GCCATGTTCT CGACGGCCAG CAAGGGCGCG
ACCGACTATT CGGCCAAGAT GTTCGAAATC GTGAAGACCA ACACCGGCGC CAGCTTCGAT
TTCGCGCATA GCCTGTTCGG CGCCAAGACG CTGCCGGAAG TGCTGGAAAT GTGGACCTCG
CACGCCAAGA AGCAGGTCGA GGTGATGACC ACCCAGACCA AGGAACTGAC CGAATTGAGC
CAGAAGGTCG CCGCCGAGGC GGTCGAGCCG ATCAAGGCCA GCGCCTCGAA GCTCTTCACC
TCGGCCGCCT GA
 
Protein sequence
MADSSDPFST VLPFQLPEQV RAFAEKGVSQ ARDSYSKLRD VAETNNGTIE AMFSTASKGA 
TDYSAKMFEI VKTNTGASFD FAHSLFGAKT LPEVLEMWTS HAKKQVEVMT TQTKELTELS
QKVAAEAVEP IKASASKLFT SAA