| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1447 |
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| Symbol | |
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| ID | 4021924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1615136 |
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| End bp | 1618741 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961639 |
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| Product | histidine kinase A-like |
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| Protein accession | YP_568585 |
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| Protein GI | 91975926 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT GGGATTTTCA GTTGCGAGGG GTCGACGATC CGCGGCTTGC GGTTCACGCC
ACGCGTGCGC TTCCGGTCTG GCTGTGGTCA GTCGATGGCA CCCGCGTGCT TTGGGCCAAC
CCGGTCGGCG CCCGGCTTTT CGGCGCGAAC AACGGCAAGG AACTCGGCGC GCGGACCTTC
GGACCGGCGG ATCCTCATCG CCGCCTCGTG GCGCAACTCG CCGGCAGATT GCCGCCGAAC
GGCGCGACCC GCCTGGAGCG GTTGCGCGGC TTCGGCGCGC GTCTCGGCGC GCTGGTGACC
TGCGCCTGCG CGCGGCTGGA TTTCGCCGAC GGCACCGCCG GCGTGCTGAT CGCCGCCGCG
GAACCGATCG GCCGCCCGAT GTCGCTGGTC GATCGGCTGC GCGGGCTGGT CGAAAGCATC
GACACCCCGA TCGCGGCATT CGCCCGCGAC GGCCTGTTCA TCGGCTCGAG CGCCGCCGCG
CGCACTTTGC TCGGCTTTCG CAACCTGACC GAAGCGGGCC TCGACCAGGC GCGCGCGGAC
GCCCTGCGAA ACGGCCGCTC CGAAACCCCG ATCGGGATCG GCCGCATGGT GCTGCAACGC
GTCGGCAGCG GCAGCGATGT CGGTCTGGTC GCGCTGCTCG CGCCGGGCGA TTCGCCAGCG
GAACAGCGCG CTACGCAAAT TCAGGATCCG GAGCTGCCTG CCGAACCGGC GCAGCAAGAC
GATCAACCAT CGGCGCAGGA AACAGAGTCT GCCTCCGAGG TCAGTCCGGA CCCGATCCAG
CCTGTCAAAT CCGTGGCGGA CGCCGACATC ACCGACGACG AGGCATTCGA AAACACCAGC
GAGGCGCCGG CCGAATTCAC ACTGCTCGGC GACGTGCTGC AAACCGCGGA AGCGCCAACG
TTACCGAGGG AGCCCGCAGC GACCGAGGCG CCGGCGGAGT TCGCACGGCT CGACGAGACC
ATGCCGGCGG CCGGAGCCGA ACCACAGCCG GCGCAAGACG TGACCGCCGT TGAAGAGGCC
TCGCCCGCTG CCGCCGAGAT CGCCCCGCTC GCCCCCTCGC CGTTGATCGC GCCGGTCGCC
GACGAGCCAC GGCCTGAAGC GCCTGCGACC GAAACACTGC CCGACAGGTC GGCGGATGCA
GCGCCTCACC CCGCGCAAAC CCCTGCGCCG CTCACCGAAG CCGAACCGAC CGCAGAGCAT
CATCCCCTCG ACGTCCCGTC GCAGGATGAC TCCGAACTTG CCGAACCGGC GATGATCCTT
GCGGTCGAGC CGGAGCCAAG CAGCGAGCTT GCGGCCTACG AACCATTGCC GCCGCGCCGG
CATCCGCTGC GATTCGTCTG GCAGCTCGAC AGCGACAGCC GCTTCACGGT GAGGTCGGAC
GAGTTCATCC GTCTGGCCGG ACCGCGCACC ATCGCGCATT TCGGTCAGCC CTGGACCGAG
ATTCGCGCGG CGCTCGACCT CGATCCCGAC GACAGTTTCG CGCAAGCCAT TGCGACGCGC
CACACCTGGA GCGGCATCAC GCTGCAATGG CCGGCCGATG GCGCCAGCCG TCGCCTTCCA
GTCGAGATGT CCGGCCTGCC GGTGCAAGAC CGCGATGGCA ACTTCACGGG ATATCGCGGC
TTCGGCGTCT GCCGCGATCT CGACGGCCTC GATCAGCTCG CGGCGCGGCG CCAGCGCGGC
GGCACGGACG AACATCCGCC ACGTTCGCTG TCGGCGGATT CCACACCGCG CGACACAACG
CTCGTCGGGG ACGCGACCGA AACGGCCGCG ACCGACGCTT CCTACCAACA ACAATCGGAT
ATCATCGTGG ACACCCCGAG AAACGTTCTT CCCTTCCGGC CTATCCACGA CGTCCGGTCG
CCGGCGCTGA CGCCGGTCGA GAACAGCGCC TTCAACGAAC TCGCCCGGCA ATTGTCGGAA
CGGCTGGAAA GCGATGCCGC CAACGCAGCG GAGCGTCTGT TCGCGGAAGC GCCGACCGAT
GCGCCGCAGG ACACAATTGT TGAGCAGCCC CCGAAGGCGA ACGAGGCCGC GCCGAGCGAT
ACCACCACGC CGCTCGAGCA ACCCGCGACG CCGAAAGCCG ACTGGCTTGC GCCGCTCGCG
ACGCCTGCGA AGGGCGACAG CGCACGCGAC CGTGTGCTGC TCGACCTGAT GCCGGTCGGC
GTGCTGATCT ACCGGCTCGA CCGTCTGATC TACGCCAACA CCGCCTTTCT GCAGCGGATG
GGCTTCGCAA CCTTGTCCGC GCTGGAAGAG GCCGGCGGCC TCGATACGCT GTATGTCGAA
GAAGGCGTCA CCGGCTCGAG CAGCACGTCG GAAAGCGGCA CGCCGATCAC CGTCACGACG
ACGCAATCGG CGCCGACCGC GGGCCGCCTT CATGCGATCG AATGGGACGG CGATCAGGCG
CTGGCGCTGA TCTTCTCCGC CACAGCCGAG CCGATCGCTG AAGTCGGCGC GGCGACGCCG
ATCGCGCCCG AGATCAATGC GCCGTCGGAT GTCGGCCATG CCAACGCCGA AGAACTCGGC
GCGATTCTCG ACACCACCGC CGAGGGCATC CTGATGTTCG ACGCCGACGG CCGGATCAGC
GCCTGCAACC GCAGCGCCGA GGCGCTGTTC GGCTATGACG GCGACGATCT GGTCCAGCGC
AACATCGCGG AGTTGTTCGC GCCTGAAAGC AACGGCGCGG TGCTCGATTA TTTCGACAGC
GTCAAGGCCG GCAGCGCCGA AAGCCTGCTC GATCACGGAC TCGAAGCGCT CGGCCGGGTG
CGCGAAGGCG GGCTGTTGCC GCTGACGATG ACGATCGGCC GGACCCAGCC CGACGGTCCG
AATTTCTTCG CCGTGTTCCG CGATCTGTCG CAGGCGCGCA AGATCGAGAC CGAACTCAAT
CAGGTACGTA AGCTCGCCGA GCGCGCGGCC GGCGCCAAAG CCGACGTCCT GGCGCGGCTC
AGCCATGAAA TCCGCACGCC GCTCAACGCC ATTATCGGCT TCGCCGAGGT GATGATCGAG
GAGCGGTTCG GCGCGCTCGG CAACGACCGC TATGGCGAGT ACATGAAAGA CATCCGCGCC
TCGGGCGAGC GCGTGATCGG CATCGTCAGC GATCTGCTCG ATCTGTCGCA GATCGAGACC
GGCAAGCTCG AGCTGTCATT CACCAGCCAG AATCTCAACG AAATGGTCGA GCAATGCGTC
GCGGTGATGC AGCCGCGCGC CAATCGCGAG CGCATCATCA TCCGCACCTC GCTCGCGCAT
CTGCTGCCGA CCGTGGTCGC CGATCCGCAA GCGCTGCGCC AGATCGTGAT GAACCTGATC
GGCACCTCGA TCCATCTCGC CAATGCGGGC GGCCAGGTAA TCGTCTCGAC CGCGCTGTCC
GATTTCGGCG AGGTGGTGCT GCGGGTGCGC GACACCGGCC AGCGCCTCAA CGAGAGCGAA
ATCGTGGCCG CGCTGCAGCC GTTCAACACA CCGGCGCCGA GCGACCGTTC GGAAACCTCG
GGCGTCAGCC TGTCGCTCAC CAAAGCGCTG GTCGAAGCCA ACCGCGCCAA GTTCCACATC
AAGAGCGCGC CGCAATCTGG AACGCTGATC GAGGTGGTGT TTTCGCACGT GCCCGCGCAG
GCGTGA
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| Protein sequence | MTSWDFQLRG VDDPRLAVHA TRALPVWLWS VDGTRVLWAN PVGARLFGAN NGKELGARTF
GPADPHRRLV AQLAGRLPPN GATRLERLRG FGARLGALVT CACARLDFAD GTAGVLIAAA
EPIGRPMSLV DRLRGLVESI DTPIAAFARD GLFIGSSAAA RTLLGFRNLT EAGLDQARAD
ALRNGRSETP IGIGRMVLQR VGSGSDVGLV ALLAPGDSPA EQRATQIQDP ELPAEPAQQD
DQPSAQETES ASEVSPDPIQ PVKSVADADI TDDEAFENTS EAPAEFTLLG DVLQTAEAPT
LPREPAATEA PAEFARLDET MPAAGAEPQP AQDVTAVEEA SPAAAEIAPL APSPLIAPVA
DEPRPEAPAT ETLPDRSADA APHPAQTPAP LTEAEPTAEH HPLDVPSQDD SELAEPAMIL
AVEPEPSSEL AAYEPLPPRR HPLRFVWQLD SDSRFTVRSD EFIRLAGPRT IAHFGQPWTE
IRAALDLDPD DSFAQAIATR HTWSGITLQW PADGASRRLP VEMSGLPVQD RDGNFTGYRG
FGVCRDLDGL DQLAARRQRG GTDEHPPRSL SADSTPRDTT LVGDATETAA TDASYQQQSD
IIVDTPRNVL PFRPIHDVRS PALTPVENSA FNELARQLSE RLESDAANAA ERLFAEAPTD
APQDTIVEQP PKANEAAPSD TTTPLEQPAT PKADWLAPLA TPAKGDSARD RVLLDLMPVG
VLIYRLDRLI YANTAFLQRM GFATLSALEE AGGLDTLYVE EGVTGSSSTS ESGTPITVTT
TQSAPTAGRL HAIEWDGDQA LALIFSATAE PIAEVGAATP IAPEINAPSD VGHANAEELG
AILDTTAEGI LMFDADGRIS ACNRSAEALF GYDGDDLVQR NIAELFAPES NGAVLDYFDS
VKAGSAESLL DHGLEALGRV REGGLLPLTM TIGRTQPDGP NFFAVFRDLS QARKIETELN
QVRKLAERAA GAKADVLARL SHEIRTPLNA IIGFAEVMIE ERFGALGNDR YGEYMKDIRA
SGERVIGIVS DLLDLSQIET GKLELSFTSQ NLNEMVEQCV AVMQPRANRE RIIIRTSLAH
LLPTVVADPQ ALRQIVMNLI GTSIHLANAG GQVIVSTALS DFGEVVLRVR DTGQRLNESE
IVAALQPFNT PAPSDRSETS GVSLSLTKAL VEANRAKFHI KSAPQSGTLI EVVFSHVPAQ
A
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