| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1431 |
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| Symbol | |
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| ID | 4021908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1596203 |
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| End bp | 1597117 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961623 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_568569 |
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| Protein GI | 91975910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.19128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAC GTCAGATCTT CACGCGGCCC GCCCGCATCG CAGTGATCGC GCCGTATCTG
TGGATGGGGC TGTTCTTCCT GGTGCCGTTC GGCTTCGTGA TGAAGATCAG CCTGTCGCAG
AGCGCGATCG CGCTGCCGCC CTACACGCCG GTGTTCGATC TCGCCGCCGG ATGGGACGCG
CTGGCGGCGG CGTTCGCCGA GCTGTCGCTC GACAATTTCC GCCTGCTGAT CTCCGACAAT
CTCTATGTGC TGTCCTATCT GCGCAGCCTC ACCGTCGCCG CGGTGTCGAC CGCGATCCTG
CTGGTGATCG GCTATCCGGT CGCTTACGCA ATGGCGCGGC TGCCGCGAGG GTGGCAGCCT
TTGGCGATGA TGCTGGTGAT CGTGCCGTTC TGGACCTCGT TCCTGATCCG GGTCTACGCC
TGGATCAACA TTCTGCAGCA CGACGGGCTG CTCAACAAAG TGCTGCTGTG GCTGCATCTG
GTCTCCGCGC CCGTGGTGTG GCTGTCGACC GACACCGCGA TGTATCTCGG CATCGTCTAT
TCCTATCTGC CGTTCATGGT GCTGCCGCTG TATGCGACGT TGGCAAAGCT GCCGCACGCG
CTCGGCGAGG CCGCGGCCGA TCTCGGTTGC TCGCCGCGCC AGGCGTTCTG GCTGGTGACG
TTTCCGCTGT CGCTGCCGGG CATCGGCGCC GGCGTGTTGC TGTGCTTCAT CCCGATCGTC
GGCGAATTCG TGATTCCGGA TCTGCTGGCC GGCTCCGGCT CGCAAATGAT CGGGCAGACG
CTGTGGCTGG AGTTCTTCAC CAACCGCGAC TGGCCGGTGG CGTCGGCGAT CGCGTTGATC
CTGCTCGCCG TGCTGCTGTT GCCGCTGACG ATCTACGAGC GGGTGCAGCT TCGCCAGCTC
GAAGGAGGGC GGTGA
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| Protein sequence | MSARQIFTRP ARIAVIAPYL WMGLFFLVPF GFVMKISLSQ SAIALPPYTP VFDLAAGWDA
LAAAFAELSL DNFRLLISDN LYVLSYLRSL TVAAVSTAIL LVIGYPVAYA MARLPRGWQP
LAMMLVIVPF WTSFLIRVYA WINILQHDGL LNKVLLWLHL VSAPVVWLST DTAMYLGIVY
SYLPFMVLPL YATLAKLPHA LGEAAADLGC SPRQAFWLVT FPLSLPGIGA GVLLCFIPIV
GEFVIPDLLA GSGSQMIGQT LWLEFFTNRD WPVASAIALI LLAVLLLPLT IYERVQLRQL
EGGR
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