| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1430 |
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| Symbol | |
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| ID | 4021907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1595044 |
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| End bp | 1596192 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961622 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_568568 |
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| Protein GI | 91975909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.444326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA ACGTTGCAAA GCGCAGCGCA CCCGCTGATG CCTCGGGTGC GCCGCTCCTT
CAAATCGAAG CGGTCGAGAA GCGATTCGGC GGCTTCGTCG CGGTGAACAG GCTGTCGCTC
GATATCCGGG CCGGCGAGTT TTTCGCGCTG CTCGGGCCGA GCGGCTGCGG CAAAACCACG
CTGCTGCGGA TGCTGGCCGG TTTCGAGACG CCCGACAGCG GCCGCATCCT GCTCGACGGG
CAGGACATCG CTGCGGTGCT GCCGCATCAG CGCCCGGTCA ACATGATGTT CCAGAACTAC
GCGCTGTTTC CGCATTTGTC GGTCGCCAAC AACATCGCCT TCGGCCTGAA GCGCGCCGGT
CTGCCGGGCC GCGAGATCAG GGAGCGCGTC GCCGAGATGG TGGCGCTGGT GAAGCTCGAA
GGCATGGAGC GGCGAAAGCC CGATCAGCTT TCCGGCGGCC AGCAGCAGCG CGTGGCGCTG
GCGCGTGCGC TGGCGCGCCG ACCGCGCCTG CTGCTGCTCG ACGAGCCGCT GGCGGCGCTC
GACAAGAAGC TGCGCGAGAG CACCCAGCTC GAACTGATGG CGCTGCAGAA GCGGCTCGGC
ATGACGTTCA TCATCGTCAC GCACGATCAG GACGAAGCCA TGACCGTGGC CGATCGCATC
GGCGTGATGC AGTCCGGCCG CCTCGCGCAG GTCGCGACGC CGCGGCAGCT CTACGAGACT
CCGGCGTCGC GGTGGGTCGC CGAGTTCGTC GGCGACGTCA ACATGCTCGA AGGCGCGATC
GAGGCGCGGG ATCACGGCCG TCTCACGGTC GCGACCGAAG GCGCCGGGAG GATCAGCATC
GCCGAGCCAC GTCAGCCGAT CGAGGCGACC TCGGTGTGCA TCGCGATCCG GCCGGAGAAG
ATCAAGCTGT CGCGGCGCGG ACCCGCCGCC GACATCGACC ACGCCGATGC GATGAACCGG
CTCGACGGCG AGGTCGCCGA GGTCGGCTAT TATGGCGGGC TGACCAGCTA CAAGATCAGA
CTCGATACCG GCGCGACGCT GCTCGCCAAG ATGGCCAACA CCACCCGGTT GGATGCCGAC
GCCTATCGCG CCGGCCAGCA CGTCGTGGCG TGGTTTGCGC CCGATGATTG CGTGGCGCTG
GACAGATGA
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| Protein sequence | MIENVAKRSA PADASGAPLL QIEAVEKRFG GFVAVNRLSL DIRAGEFFAL LGPSGCGKTT
LLRMLAGFET PDSGRILLDG QDIAAVLPHQ RPVNMMFQNY ALFPHLSVAN NIAFGLKRAG
LPGREIRERV AEMVALVKLE GMERRKPDQL SGGQQQRVAL ARALARRPRL LLLDEPLAAL
DKKLRESTQL ELMALQKRLG MTFIIVTHDQ DEAMTVADRI GVMQSGRLAQ VATPRQLYET
PASRWVAEFV GDVNMLEGAI EARDHGRLTV ATEGAGRISI AEPRQPIEAT SVCIAIRPEK
IKLSRRGPAA DIDHADAMNR LDGEVAEVGY YGGLTSYKIR LDTGATLLAK MANTTRLDAD
AYRAGQHVVA WFAPDDCVAL DR
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