Gene RPD_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1427 
Symbol 
ID4021904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1590427 
End bp1590609 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content57% 
IMG OID637961619 
Producthypothetical protein 
Protein accessionYP_568565 
Protein GI91975906 
COG category[S] Function unknown 
COG ID[COG5570] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.211415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTC AGGCGCATCT CGTTGAACTT GAACGTAAAC ACAAAGTTCT AGAGTCCCAG 
TTGCACGACG CGCTCGTCCA TCCCTCCACC GACGCTCTGC GCATCGCCGA GCTGAAACGC
CGCAAGCTTA TGGTCCGGGA CGAGATCAAC CGGCTGCGGC AAGTCTCCAG CACACTCCAT
TGA
 
Protein sequence
MALQAHLVEL ERKHKVLESQ LHDALVHPST DALRIAELKR RKLMVRDEIN RLRQVSSTLH