Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1421 |
Symbol | |
ID | 4021898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1585832 |
End bp | 1586707 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961613 |
Product | hypothetical protein |
Protein accession | YP_568559 |
Protein GI | 91975900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.697302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAAT ACATCACCGA AAAATTGATC GGGCAGATTC TGCCGTCGGT GGTCGCCACC GTGCTCGGCG CTTATGTCGT GAACCAGTAC ATCACCAGGC CGAATCCGCC GGCCGCCACC CAAGCCGAGG CGGCGAAGCC GGCGTCGGGC GCCGAGACGC CGGCGCTGAA CGCATCGCTG CCCGATTCCG ACAAGGCCGA CCCGGTCAAG GGCAAGGCGT CAGCGGCCGA CAAGGCAGCC GAGAAGCCGT CGCCGCGGCA TTCCATTGCG CGCGACAAGG CTGCTGCAGA GAAAGCGGCC GCGGACAAGC TCGCCGCCGA CAAGGCTGCT GCCGAGAAAG CCACGGCCGA CAAGGCTGTT GCGAAGCCGG CCGTGGCCAC GGTGGCGTCC GAGTCTGCCA AGGCTCAGGA CAAGGCCCAG GAGAAGGCTC AGGACGAGCG CCGCGACGCC AACCGTGATC CCAACGACGT GGTCCGCGCC GCCATCGAGC GGCTGCGTGC ATCGGAGCCC GCGCGTCCGG CGTCGACCGA AGTCACCTCG CGGACGCCTG AGCCTCTCAA GGTCCAGGAG CCTCTCAAAG TGCAGGAGGC CGTCAAGGTC CAGGAGGCGC CGCGCGCCGT CGCGCTGCAG CCGCTGCCGG CCCCGGTCAA CGTTGCCACG CCAGTTCCCA ACGCGTCGGT GACCACCGGC TCGAGCGTCA CCGGCTCCGT GCCATCCGCC GCCACGGCGG ATGCGAGCTA CGGCAATCCG CGGATCAGCC CCCCGGCGGA TATTCCCTCC GCCGCTGATG GCGGCGGGAC ACAGCAACGG CCGTCGGTTG CCGAAGATGT GCTGCTCGCT GCGAAATCGG TGTTCCACGC GGTCCTGCCG CGCTGA
|
Protein sequence | MLKYITEKLI GQILPSVVAT VLGAYVVNQY ITRPNPPAAT QAEAAKPASG AETPALNASL PDSDKADPVK GKASAADKAA EKPSPRHSIA RDKAAAEKAA ADKLAADKAA AEKATADKAV AKPAVATVAS ESAKAQDKAQ EKAQDERRDA NRDPNDVVRA AIERLRASEP ARPASTEVTS RTPEPLKVQE PLKVQEAVKV QEAPRAVALQ PLPAPVNVAT PVPNASVTTG SSVTGSVPSA ATADASYGNP RISPPADIPS AADGGGTQQR PSVAEDVLLA AKSVFHAVLP R
|
| |