Gene RPD_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1421 
Symbol 
ID4021898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1585832 
End bp1586707 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID637961613 
Producthypothetical protein 
Protein accessionYP_568559 
Protein GI91975900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.697302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT ACATCACCGA AAAATTGATC GGGCAGATTC TGCCGTCGGT GGTCGCCACC 
GTGCTCGGCG CTTATGTCGT GAACCAGTAC ATCACCAGGC CGAATCCGCC GGCCGCCACC
CAAGCCGAGG CGGCGAAGCC GGCGTCGGGC GCCGAGACGC CGGCGCTGAA CGCATCGCTG
CCCGATTCCG ACAAGGCCGA CCCGGTCAAG GGCAAGGCGT CAGCGGCCGA CAAGGCAGCC
GAGAAGCCGT CGCCGCGGCA TTCCATTGCG CGCGACAAGG CTGCTGCAGA GAAAGCGGCC
GCGGACAAGC TCGCCGCCGA CAAGGCTGCT GCCGAGAAAG CCACGGCCGA CAAGGCTGTT
GCGAAGCCGG CCGTGGCCAC GGTGGCGTCC GAGTCTGCCA AGGCTCAGGA CAAGGCCCAG
GAGAAGGCTC AGGACGAGCG CCGCGACGCC AACCGTGATC CCAACGACGT GGTCCGCGCC
GCCATCGAGC GGCTGCGTGC ATCGGAGCCC GCGCGTCCGG CGTCGACCGA AGTCACCTCG
CGGACGCCTG AGCCTCTCAA GGTCCAGGAG CCTCTCAAAG TGCAGGAGGC CGTCAAGGTC
CAGGAGGCGC CGCGCGCCGT CGCGCTGCAG CCGCTGCCGG CCCCGGTCAA CGTTGCCACG
CCAGTTCCCA ACGCGTCGGT GACCACCGGC TCGAGCGTCA CCGGCTCCGT GCCATCCGCC
GCCACGGCGG ATGCGAGCTA CGGCAATCCG CGGATCAGCC CCCCGGCGGA TATTCCCTCC
GCCGCTGATG GCGGCGGGAC ACAGCAACGG CCGTCGGTTG CCGAAGATGT GCTGCTCGCT
GCGAAATCGG TGTTCCACGC GGTCCTGCCG CGCTGA
 
Protein sequence
MLKYITEKLI GQILPSVVAT VLGAYVVNQY ITRPNPPAAT QAEAAKPASG AETPALNASL 
PDSDKADPVK GKASAADKAA EKPSPRHSIA RDKAAAEKAA ADKLAADKAA AEKATADKAV
AKPAVATVAS ESAKAQDKAQ EKAQDERRDA NRDPNDVVRA AIERLRASEP ARPASTEVTS
RTPEPLKVQE PLKVQEAVKV QEAPRAVALQ PLPAPVNVAT PVPNASVTTG SSVTGSVPSA
ATADASYGNP RISPPADIPS AADGGGTQQR PSVAEDVLLA AKSVFHAVLP R