| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1409 |
|---|
| Symbol | |
|---|
| ID | 4021886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1576705 |
|---|
| End bp | 1577367 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961601 |
|---|
| Product | integral membrane protein TerC |
|---|
| Protein accession | YP_568547 |
|---|
| Protein GI | 91975888 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.207515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT TTCTGACGAT CTTTACCCCA GAAGGCCTGA CCGCGCTGGC GCAGGTCATC
ATGATCGACC TGGTGCTCGC CGGCGACAAC GCCGTGGTCA TCGGCCTCGC CGCCGCTGGC
CTGCCGAAAG AGCAGCGCGG CAAGGCGATC CTGATCGGCA TCATCGCCGC CACCGTGCTG
CGTATCCTGT TCGCCAGCGT CACCGTCCAA TTGCTGCAGA TCCTCGGCCT GTTGCTGGCC
GGCGGCGTGC TGCTGCTCTG GGTGTGCTGG AAGATGTGGC GTGAGCTGCG AACCCAGCAT
CCGGATGACG ACGATGTCTC GGAGGACGCC AGCCGAATCG GCGCCTCATC CGCCGGGCCG
ACCAAGACGT TGGGTCAGGC GGTGTGGCAG ATCACGCTGG CCGACGTCTC GATGTCGCTC
GACAACGTGC TCGCGGTGGC GGGCGCCGCG CGCGAACACC CGATCATTCT GATCTTCGGT
CTCGGCCTGT CGATCGCGCT GATGGGTCTC GCCGCGACCG TGATCGCCAA GCTGCTGCAG
AAGCATCGCT GGATCGCCTA TGTCGGTCTC GTCATCATTC TCTACGTGGC GCTCGACATG
ATCTATCGCG GCGTCCTGGA AGTTTGGCCG CACGCATTCA CCGCGCTTTC GTCACTTTCA
TGA
|
|---|
| Protein sequence | MTEFLTIFTP EGLTALAQVI MIDLVLAGDN AVVIGLAAAG LPKEQRGKAI LIGIIAATVL
RILFASVTVQ LLQILGLLLA GGVLLLWVCW KMWRELRTQH PDDDDVSEDA SRIGASSAGP
TKTLGQAVWQ ITLADVSMSL DNVLAVAGAA REHPIILIFG LGLSIALMGL AATVIAKLLQ
KHRWIAYVGL VIILYVALDM IYRGVLEVWP HAFTALSSLS
|
|---|
| |