| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1408 |
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| Symbol | |
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| ID | 4021885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1575141 |
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| End bp | 1576643 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961600 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_568546 |
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| Protein GI | 91975887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.722973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAGC GGATTCTGAT CGCAGACGAC GACCCGGTGC AGCGCCGGCT GGTCGAGAAC
ATGGTGCAGA AGTGCGGCTA CGAGGCCGTG CTGGCCGATA GCGGCGACGC CGCGATCGCG
CTGCTGACAG CGCCGGACGC CGCCGCGATC GACGCCGTGG TGCTCGATTT GGTGATGCCG
GGCCTCGATG GCCTCGGCGT GCTCGGCAAG ATTCGCGAGT CGGGCCTGAA CGTCCCGGTC
ATCGTGCAGA CCGCGCATGG CGGCATCGAC AACGTAGTGT CGGCGATGCG CGCAGGCGCG
CATGATTTCG TCGTCAAGCC GGTCGGCATC GAGCGGCTGC AGGTATCCTT GCGCAACGCG
CTGAACGCCA GCGCGCTGAA GGGCGAGCTG CAGCGCATCC GCCACAGCCG CGAGGGCCGG
CTCACCTTCG CCGACATCAT CACCCGCAGC GAGTCGATGG CCGCCGTGCT GCGCGCCTCC
GAGAAGGCCG CAGCTTCCTC GATCCCGGTG CTGATCGAGG GCGAATCCGG CGTCGGCAAG
GAGATGTTCG CGCGCGCCAT TCACGGTTCG AGCGAGCGGC GGAGCAAACC GTTCGTCGCG
GTCAACTGCG GCGCGATCCC CGACAATCTG GTCGAGTCGA TCCTGTTCGG TCACGAGAAG
GGCGCGTTCA CCGGCGCCAC CGACCGTCAC ATGGGCAAGT TCGTCGAGGC GACCGGCGGC
ACGCTGTTTC TGGACGAGGT CAGCGAGTTG CCGCTGGCCG CGCAGGTCAA GCTGCTGCGC
GCGCTGCAGG AAGGCGCGGT CGAGGCGGTC GGCGGGCGCA AGCCGCTGAA GGTCGACGTC
CGCATCATCT CGGCGACCAA TCGCCGCCTG CTCGACCGGG TCAAGGCCGG CCAGTTCCGC
GAAGACCTGT TCTATCGGCT GCACGTGCTG CCGCTGACGG TCCCGCCGCT GCGATCACGG
CGCGAGGACA TCCCGCCGCT GCTGCGGCAT TTTCTGGTGC GGTTCTGCGC CGAGGAAAAC
CGCACGATCG GCGGCATCAC CGGCGAGGCG ATGGCCCGCC TCGCCCAGCT CGACTGGCCG
GGCAACATCC GCCAGCTCGA AAACGCCGTG TACCGCGCGG TGGTGATGAG CGACAGCGAC
CAGCTCGGCG TCGACGACTT CCCGCTCGCG AGCGCGCCCT CGACCGTCCC GACCGGCGAG
GCGGACGGCG AGCCGCTGAT CCTGGAGCCG CCGACCTCGG CGCAATTCGT CGCCGCCAAC
GAGGCGCCGA TCGCGCCGCT GCCGACCCAT GGCAGCCTGC CGATGCTGAA CAGCGACAAT
GATGTCCGGG CGCTGGACGA GCTGGAGAGC GAGATCATCC GCTTTGCGAT TTCCCATTAT
CGCGGCCAGA TGTCCGAAGT GGCACGGCGG CTGAAAATCG GCCGCTCGAC GCTGTATCGC
AAGCTCGACG AGATGGAAGC TGTTCGGGCG GCGCAGGCGT CATCGCCGGC GAATACCCGC
TGA
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| Protein sequence | MVERILIADD DPVQRRLVEN MVQKCGYEAV LADSGDAAIA LLTAPDAAAI DAVVLDLVMP
GLDGLGVLGK IRESGLNVPV IVQTAHGGID NVVSAMRAGA HDFVVKPVGI ERLQVSLRNA
LNASALKGEL QRIRHSREGR LTFADIITRS ESMAAVLRAS EKAAASSIPV LIEGESGVGK
EMFARAIHGS SERRSKPFVA VNCGAIPDNL VESILFGHEK GAFTGATDRH MGKFVEATGG
TLFLDEVSEL PLAAQVKLLR ALQEGAVEAV GGRKPLKVDV RIISATNRRL LDRVKAGQFR
EDLFYRLHVL PLTVPPLRSR REDIPPLLRH FLVRFCAEEN RTIGGITGEA MARLAQLDWP
GNIRQLENAV YRAVVMSDSD QLGVDDFPLA SAPSTVPTGE ADGEPLILEP PTSAQFVAAN
EAPIAPLPTH GSLPMLNSDN DVRALDELES EIIRFAISHY RGQMSEVARR LKIGRSTLYR
KLDEMEAVRA AQASSPANTR
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