| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1407 |
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| Symbol | |
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| ID | 4021884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1572630 |
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| End bp | 1574780 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961599 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_568545 |
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| Protein GI | 91975886 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.281728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGATC ACTCGACTGG CCGCCGCGGT TTTGAAGGTG TGCTGATGGC CGTTGCGGCA
ACCTTCCTGA CCGTATCGGT GACCTCTGCG ATCGCGCAAT CGCCCAGCAA ATCCCCCGCC
GATCTCGCCA TCGACGCCGC CGTTCCGGTG CCGCAGCCGG TCGACCTGCC GCCGCCGTCG
ATCGGCGATT TCAAGCCCGA CACGCTGGCC GCTCCGGTGA ATCCGCCGGC CGAGACCAAG
ACCGACAGCG CCGCCGCGCC CACGCAAGCC GCGCCCGCAC AGGCTGCGCC TGCGCCGACC
GCAGCGGCGC CGGAAACGGC CCCGCCGCCC GCCGCCACCG CAACGGCGCC CGCCGCCGAG
CCCGCCAAGG AGCCGGTGAA GGCGCAGGCA ACCAAGGACC AGCCCGCCGA GCCGCAGAAG
GCCGCGAGCA GTGTGCCGGC CGCCGATCAG CCGGTCGCCG ACAAGGTGCG CGACACGCTC
GCCACCAAGG CGGCGCGCTA TTTCGACCGC AAGGCCGAGC GCGCCGCGGT CGAGAAATTC
TATGAAGGGC GCGACTACGC GCCGGTGTGG ACGGCGTCGG GCGCCTTGAC GTCCGCCGGA
AAGGGTGTGA TCGCGCGGCT GAAGGACGCC GCCGCCGACG GCCTCGATCC GACCGATTAC
CCGGTGCCGG ATTTCGCCGC CGCGACCTCG CCCGACGCGC TCGCCGAGGC CGAGCTGCGG
CTGACCGAGA GCATGATGGA CTATGCGCGC CAGGCGCAGA GCGGCCGGAT GCACTGGTCG
CAGGCCGGCT CCGACATTCA GTATCCGGAA CACCCGATCG ATCCGGCCGA AGTGCTCGCC
AACGTCACCA CCGCGAAGGA CGCCTCGGCG GCGCTCGACA GCTACAACCC GCCGCACAAG
CCGTATCGCG AACTGAAGAA GAAGCTCGCC GAACTGCGCG GCGAAAGCGG CATGCCGGTG
CTCAAGATCG CCGAGGGCGA GACGCTGAAA TTCGTGCCGG CGCGCAAGAA GCAGCCGGCG
GTGACCATGG ACGATCCGCG CGTGCCGCAA CTCCGCGCCA AGCTCGGGAT CACCGAGGAC
GCCGATAGCT CCACCTACGA CGCCAAGGTC GCCGAAGCGG TGCGCAAATT CCAGCGCAGC
GCCGATCTGA AGCCGACCGG CGTGCTCGAC GACCGCACCG TCAAGGTGCT GAACACGCCG
AAGCGCGACC GCAGCATCGA CACCATTATC GTCAACATGG AGCGCTGGCG CTGGCTGCCG
CGCCAGCTCG GCGCGGCCTC GATCGGCAAC GCCTATGTGA TCCTCAACAT CCCGGACTAC
ACGCTGAAGG TGATGCAGAA CGGCGCCCAG GTCTGGACCA CGCGCGTGGT CACCGGCAAG
CCCGGCAAGC ACGCGACGCC GCTGCTGACG GAAACGATGA AGTACATCAC CGTCAACCCG
ACCTGGAACG TGCCGCCCTC GATCATCAAC AACGAGTACC TGCCGGCGCT TGCGCAGGAC
CCGACCGTGC TCGACCGGAT GGGCCTGAAG ATGTCGCGTA ATCGCGACGG CTCGATCCAC
ATCTCGCAGC CGCCGGGCGA AGCCAATGCG CTCGGCCGCG TCCGCTTCAA CTTCCCGAAC
AAGTTTCTGG TGTATCAGCA CGACACCCCG GACAAGAATC TGTTCGCCCG TGACGAGCGC
GCCTTCAGCC ACGGTTGCAT GCGGGTGCAG AACCCCGATC AATACGCCGC GGCGTTGCTC
AACATCACCA TGCCGAACGA GCGCTATACG CCGGAGAAGA TCCGCTCGAT GTACGGCCGC
AGCGAGATCG ACCTGAAATT CCCGACGCCG ATCCCGGTCA ACATCACCTA CCAGACCGCG
TTCGTGGACG ATGACGGCAA GCTGCAGATC CGCAAGGACA TCTACGGCCG CGACTCCGCC
ATGCTGGCGA TCTTGCGCAA CGACAAGGGC AAGAACCTCG AAGCCGTGGT TGCTCACTCC
CAGCCGAATT ACAGCCGCCC GACCAATCTG CCGCCGGGCG TGAACGTCGC CGGGGACTAC
ACCGGGTCGT CGCAGGCCTC CGGCTTCAAC TTCTTCGAGC GGCTGTTCGG CGGTCCTCCG
GCACCTCCGC AGCAGCAGAT GCGCCGCCAG CAACAGCGCT ACACCCGCTG A
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| Protein sequence | MRDHSTGRRG FEGVLMAVAA TFLTVSVTSA IAQSPSKSPA DLAIDAAVPV PQPVDLPPPS
IGDFKPDTLA APVNPPAETK TDSAAAPTQA APAQAAPAPT AAAPETAPPP AATATAPAAE
PAKEPVKAQA TKDQPAEPQK AASSVPAADQ PVADKVRDTL ATKAARYFDR KAERAAVEKF
YEGRDYAPVW TASGALTSAG KGVIARLKDA AADGLDPTDY PVPDFAAATS PDALAEAELR
LTESMMDYAR QAQSGRMHWS QAGSDIQYPE HPIDPAEVLA NVTTAKDASA ALDSYNPPHK
PYRELKKKLA ELRGESGMPV LKIAEGETLK FVPARKKQPA VTMDDPRVPQ LRAKLGITED
ADSSTYDAKV AEAVRKFQRS ADLKPTGVLD DRTVKVLNTP KRDRSIDTII VNMERWRWLP
RQLGAASIGN AYVILNIPDY TLKVMQNGAQ VWTTRVVTGK PGKHATPLLT ETMKYITVNP
TWNVPPSIIN NEYLPALAQD PTVLDRMGLK MSRNRDGSIH ISQPPGEANA LGRVRFNFPN
KFLVYQHDTP DKNLFARDER AFSHGCMRVQ NPDQYAAALL NITMPNERYT PEKIRSMYGR
SEIDLKFPTP IPVNITYQTA FVDDDGKLQI RKDIYGRDSA MLAILRNDKG KNLEAVVAHS
QPNYSRPTNL PPGVNVAGDY TGSSQASGFN FFERLFGGPP APPQQQMRRQ QQRYTR
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