Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1397 |
Symbol | |
ID | 4021874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1563365 |
End bp | 1564234 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961589 |
Product | amidohydrolase 2 |
Protein accession | YP_568535 |
Protein GI | 91975876 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.70619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.985512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC CCGACGACCT CGTCGCCATC GACATCCACA CCCACGCCGA GGAGCCCTGC GGCTCGCACC CCGACGACGG CTATGACGAT TTCCAGGTGC GGATGGCGGA GTATTTCGGC TCGCCGAACA AGCATCCGCC GACCGTGCCG GAGACCGCGG CCTATTATCG CTCCAAGAAA ATCGCGGCGG TGATCTTCCC GGTCGACGCC GAGCGCGAGA CCGGCTTTCG CCGCTACAAC AACGACGAGA TGATCGAGAT CACGCGGCAG AACTCCGACG TACTGATTCC GTTCGCTTCG ATCGATCCGC ACAAGGGCAA GCTCGGGGTG CGCGAGGCGA AGCGGCTGAT CGCCGATTAC GGCATCAAGG GGTTCAAATT TCACCCGACG ATGCAGGGCT TCTATCCCAA CGATCGCCTC GCTTATCCGC TGTATGAAGC GATCCAGGAA GGCGGCGCGA TCGCGCTGTT CCACACCGGC CAGACCGGTG TCGGCTCCGG GATGCCGGGC GGCATGGGAA TGCGGCTGAA ATTCTCCAAC CCGATCTACA TGGACGACGT CGCCGCTGAC TTCCCCGACA TGAAGATCAT CCTCGCGCAT CCCTCCTTCC CATGGCAGGA GGAGGCGCTG TCGGTCGCGA CCCACAAGCC GAACGTCTAT ATCGACCTGT CGGGCTGGTC GCCGAAATAC TTCCCGCCGA TCCTGGTGCG CTACATCAAC GGCCTGTTGC AGGACAAGAT GCTGTTCGGC TCCGACTGGC CGGTGATCAC CCCGGACCGA TGGCTCGCAG ACTTCGCCAA ACTCGAGATC CGCGACGAGA TTCGCCCGAA GGTGCTGAAG CAGAACGCCC GGAAGCTGCT GGGAATCTGA
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Protein sequence | MLNPDDLVAI DIHTHAEEPC GSHPDDGYDD FQVRMAEYFG SPNKHPPTVP ETAAYYRSKK IAAVIFPVDA ERETGFRRYN NDEMIEITRQ NSDVLIPFAS IDPHKGKLGV REAKRLIADY GIKGFKFHPT MQGFYPNDRL AYPLYEAIQE GGAIALFHTG QTGVGSGMPG GMGMRLKFSN PIYMDDVAAD FPDMKIILAH PSFPWQEEAL SVATHKPNVY IDLSGWSPKY FPPILVRYIN GLLQDKMLFG SDWPVITPDR WLADFAKLEI RDEIRPKVLK QNARKLLGI
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