Gene RPD_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1396 
Symbol 
ID4021873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1562771 
End bp1563253 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID637961588 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_568534 
Protein GI91975875 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCG ACTCCGTTCG CGCCTGGTTC GCGCAACACG CCCCGGACAT TACCGTCGAG 
GAATCCGACA AGAGCTCCGC CACCGTGCCG CTCGCAGCCG AAGCCCATGG CGTGCCGCCG
GAGCAGATCG CCAAGACGCT GTCGCTGCGG GTCGGCGAAC GCGTCGTGCT GGTGGTGACC
AGCGGCACGG CGCGGCTCGA CAACAAGAAG GCCAAGGCGG CGTTCGGCGC CAAGCCGAAG
ATGCTCGGCG TGCACGAGGT CGCCGATCTC ACCGGTCATG AAGTCGGCGG CGTCTGCCCG
TTCGGCCTGA AAGATCCGCT GCCGATCTAT TGCGACATCA CCCTGCAGGC GTTCGACATT
GTGCTGCCGG CGGCGGGCTC CATCAACAGC GCGGTGCGGA TCGCGCCGCG GCGGATGGCG
GAACTGGTCG GCGCCGAATG GGTCGATGTC AGCGAGATGC GCGCCGAACA GCAGGGGGCC
TGA
 
Protein sequence
MSLDSVRAWF AQHAPDITVE ESDKSSATVP LAAEAHGVPP EQIAKTLSLR VGERVVLVVT 
SGTARLDNKK AKAAFGAKPK MLGVHEVADL TGHEVGGVCP FGLKDPLPIY CDITLQAFDI
VLPAAGSINS AVRIAPRRMA ELVGAEWVDV SEMRAEQQGA