Gene RPD_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1383 
Symbol 
ID4021860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1553187 
End bp1554122 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID637961576 
Productglutaminase 
Protein accessionYP_568522 
Protein GI91975863 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2066] Glutaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG ACCTTCTCGA CCGCACCGTC GCAGAGATCG CCGAAGAGAT GGCGCAGCGG 
ACCGACCGCG GCGAGGTGGC GAACTACATT CCCGAACTGG CGCGGGTCGA TCCGCAGGGC
TTCGGCCTCG TGGTGATCGA CGCCGATGGC CATGTCGCGG CCGGCGGTGA CGCCGATCTG
CCGTTCTCGA TCCAGAGCAT CTCGAAAGTG TTCACGCTGA CGCTGGCGCT GGGCAAAGCC
GGCGACCGGG TGTGGCGCAG GGTCGGCCGC GAGCCGTCCG GCACGGCGTT CAATTCGATC
GTCCAGCTCG AGCGCGAGCG CGGCATTCCG CGCAATCCAT TCATCAATGC CGGCGCGATC
GCCGTCACCG ACCTGATTCT GTCGGGGCAT CAGCCCCGCG AGGCGCTCGG CGAAATTCTC
CGCTTCATGC AATTCCTCGC CGCGGATTCG GCGATCACGA TCGACGAGGC GGTGGCGGCC
TCCGAGCAAC GCACCGGCTT CCGCAACGCT GCGCTCGCCA ATTACATGAA ATCCTTCGGC
GTGCTCGACA ATCCGGTCGA CTACACGCTC GGCGTTTATT TCCACCATTG CGCGATCGCG
ATGAGCTGCC GCCAACTTGC GATGGCCGGG CGCTTCCTCG CGCATAACGG CCGCAACCCG
TCGACCGGTC ACAACGTGGT GTCGGCGCAG CGGGCGCGGC GCATCAACGC GCTGATGCTG
ACCTGCGGGC ATTACGACGG TTCGGGCGAG TTCGCCTATC GGGTCGGTCT GCCGGGGAAA
AGCGGGGTGG GCGGGGGCGT GCTGGCCGTG GCGCCGGGCA AGGCCTCGAT CGCGGTGTGG
TCGCCGGGGC TCGATGCCTC GGGGAATTCC CATCTCGGCC GGATTGCGCT GGAAGCGCTG
ACCAAGCGGC TGGGCTGGTC GATTTTCGGC GTCTGA
 
Protein sequence
MSTDLLDRTV AEIAEEMAQR TDRGEVANYI PELARVDPQG FGLVVIDADG HVAAGGDADL 
PFSIQSISKV FTLTLALGKA GDRVWRRVGR EPSGTAFNSI VQLERERGIP RNPFINAGAI
AVTDLILSGH QPREALGEIL RFMQFLAADS AITIDEAVAA SEQRTGFRNA ALANYMKSFG
VLDNPVDYTL GVYFHHCAIA MSCRQLAMAG RFLAHNGRNP STGHNVVSAQ RARRINALML
TCGHYDGSGE FAYRVGLPGK SGVGGGVLAV APGKASIAVW SPGLDASGNS HLGRIALEAL
TKRLGWSIFG V