Gene RPD_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1382 
Symbol 
ID4021859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1552445 
End bp1552954 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content69% 
IMG OID637961575 
Producthypothetical protein 
Protein accessionYP_568521 
Protein GI91975862 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.354025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCG TTAAGAACGG CGCGATCGTC GCCGACGACT TCGTCGCTGT CGCCGACGAC 
GCCGAACTGC CCGCGGGCGG CGCCGTGCTG ATCTCGGCCG CGCGTTTCCT TGCCGACGCC
GAGGCGCTGG CGACTCGCAA CGCGCCGCTG GGCGTGATCT GGCCGAACAA TCGCGACGTC
GCCGAGCTTG CGCCGTGGCT CGATAGGCTG TCGCTGATCG CGCTGGTGTT CCCCACCTTC
AGGGACGGCC GGGCGCACAG CCAGGCGCGC CGGTTACGCG AGATCGACGG ATTCCGCGGC
GAGCTGCGCG CCACCGGACA GATTCTCCGC GATCAGTTCA CGTTTCTGCT GCGCAACGGC
TTCGACGCCT TCGCCGTCGC CAAAGAGTCG GATGCGCACG CCTTCAGCGA GGCGACGCAT
CGCTACACCG AATTCTATCA GCCGACCGGC GACGGCCATC TCAGCGCGCT GCAGCGCCGC
CGCAAGCGGC ACACCGCGGC GGCTACCTAG
 
Protein sequence
MPLVKNGAIV ADDFVAVADD AELPAGGAVL ISAARFLADA EALATRNAPL GVIWPNNRDV 
AELAPWLDRL SLIALVFPTF RDGRAHSQAR RLREIDGFRG ELRATGQILR DQFTFLLRNG
FDAFAVAKES DAHAFSEATH RYTEFYQPTG DGHLSALQRR RKRHTAAAT