Gene RPD_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1377 
Symbol 
ID4021854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1546677 
End bp1547504 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID637961570 
ProductSulfate ABC transporter, permease protein CysT 
Protein accessionYP_568516 
Protein GI91975857 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGACGCA GCGTCATTCC CGGATTTGGC CTCAGCCTCG GCATCACCGT GCTGTATCTC 
GGCGCGATCG TGCTGCTGCC GCTGTGCGCG CTGATCCTGA AGGCCTCCGA CATCGGCCCG
GCGCAGCTCT GGGCGATCCT GTCGTCGCCG CGCACGCTGG CGGCGATCCG GCTGACGGTG
ACGATGGCGC TCGCGGCCAC GATCTTCAAT GCGATCTACG GCCTGCTGCT CGCCTGGGTG
CTGGCGCGCT ATCAGTTTCC CGGCAAGCGC CTGCTCGACG CGCTGGTCGA CGTGCCGTTC
GCGCTGCCGA CCGCGGTCGC GGGTCTGGCG CTGACGGCAT TGTTCTCAAA AACCGGCTGG
TTCGGGTCCG TGCTCGAGCC GCTCGGCGTA AGCGTCGTCT ACACTCCGCT CGGCATCGCC
ATCGCGATGG CGTTCACCAG CATTCCCTTC GTGGTGCGCA CGGTGCAGCC GGTGATCGAG
GATCTCGGCA GCGACGTCGA GGAAGCCAGC CGCTCGCTCG GCGCCAGCGA TCTGCAGATC
CTGTCGCGGA TCATCTTTCC ATCGATCTTT CCCGCGCTGC TGGCCGGCTG CTCGCTGGCG
TTCGCGCGCA GCCTCGGCGA ATTCGGCGCG GTGATCTTCA TCGCCGGCAA CCAGCCGATG
AAGACCGAGA TCGTCGCTCT GCTCGCCTTC ATCCGGCTCG AAGAATATGA CTACCCGGCG
GCCGCCGCGA TCGCGACCGT GATGCTGGCG ATGGCCTTCG CCATGCTGAT CGTCACCAAC
GCGGTTCAAG CCTGGCAGCT CCGCTATCTC GGACGGGGCA ACGCGTGA
 
Protein sequence
MRRSVIPGFG LSLGITVLYL GAIVLLPLCA LILKASDIGP AQLWAILSSP RTLAAIRLTV 
TMALAATIFN AIYGLLLAWV LARYQFPGKR LLDALVDVPF ALPTAVAGLA LTALFSKTGW
FGSVLEPLGV SVVYTPLGIA IAMAFTSIPF VVRTVQPVIE DLGSDVEEAS RSLGASDLQI
LSRIIFPSIF PALLAGCSLA FARSLGEFGA VIFIAGNQPM KTEIVALLAF IRLEEYDYPA
AAAIATVMLA MAFAMLIVTN AVQAWQLRYL GRGNA