| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1375 |
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| Symbol | |
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| ID | 4021852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1543492 |
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| End bp | 1545666 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961568 |
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| Product | malate synthase G |
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| Protein accession | YP_568514 |
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| Protein GI | 91975855 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.209074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTA TCGACGCCCA CGGCTTGAAA ATTGCGCCTG TCCTGTTCGA CTTCATCGCC
AAGGAGGCCG CGCCGAAGAC CGGCGTTGCG CCCGACGCAT TCTGGGCCGG GCTCGCGGCC
ATCGTCCGCG ACCTGACGCC CAAGCTCCGC AAGGCGCTGA CCACGCGCGA CGATCTCCAG
GCCAAAATCG ACGCCTGGCA CCTCGCCAAC AAGGGCAAGA AGCAGGATCT CGCGGTCTAC
ACCGCCTTCC TCAAGGAGAT CGGCTATCTG CAGCCGGAGC CGGCGACGGT TGCGGTCGAG
ACCGCCAATG TCGACGAGGA GATCGGCAAG CTGTGCGGCC CGCAGCTCGT GGTGCCGCTG
TCGAACGCGC GCTACGCGCT GAACGCGGCG AATGCGCGCT GGGGCTCGCT GTATGACGCG
TTCTACGGCA CCGATGCGAT CCCGCAGGAA GCCACTCAGG CCAAGGGCTA CGACAAGGCG
CGCGGCGACA AGGTGATCGC CAAGGCCAAG GCGTTCCTCG ACCAGGCCGC GCCGCTGGTG
GCCGGCAGCC ACAGCGACGT CACCGCCTAC AGCGTGATCG CCGGCCAGTT CTCGGCCAAG
CTGAAGAGCG GCAACGCCAC CGGCCTGAAG AAGCCTGAGC AGTTCGCCGG CTATCTGGGC
GACGCCGCGT CGCCGAGCGC CGTGCTGGTG GTCAATAACG GCCTGCACAT CGAGATCAAG
ATCGACCGCG CCAACACCAT CGGCAAGGAC GATCCGGCCG GCGTCGCCGA CCTGGTGATC
GAGTCCGCGG TCTCGACCAT CCTCGACATG GAAGACTCGG TCGCGGCGGT CGACGCCGAA
GACAAGGTGC TGATCTATCG TAACGTGCTC GGCCTGATGG ACGGCACGCT GTCGGAGAGT
TTCGACAAGG GCGGCAAGAC CGTCACTCGC GCGCTGAACG GCGACCGCAC CTATACCGGC
CCCGACGGCA AGGACATCAC GCTGCACGGC CGCAGCCTGT TGCTGATGCG CAATGTCGGC
CATCACATGT GGACCGACGC GGTGCTCGAC GCCGACGGCG CGGAGATTCC GGAAGGCTTC
CTCGACGCCG CCGTCTCCGG CCTGATCGCG ATCCACGACC TCAAGGCGCT CGGCAAGACC
CGCAACAGCC GCAGCGGCTC GGTCTACATC GTCAAGCCGA AGATGCACGG CCCGGACGAA
GTGGCGCTGA CCTGCGAGCT GTTCGGCCGC GTCGAGAAGA TGCTCGGCCT GAACGACAAC
ACGCTGAAGG TCGGCATCAT GGACGAGGAG CGCCGCACCA CGGTGAACCT CAAGGCCTGC
ATTCAGAATG CGTCGAAGCG GATCGTGTTC ATCAACACCG GCTTCCTCGA CCGCACCGGC
GACGAGATCC ACACCTCGAT GGAAGCGGGT CCGATGATCC GCAAGAACGA GATGAAGGCG
CAGCCCTGGA TCAAGGCCTA TGAAGACTGG AATGTCGATA CCGGCCTGAT CGACGGCCTG
CCCGGCCACG CCCAGATCGG CAAGGGCATG TGGGCGGCGC CGGACAAGAT GGCCGACATG
CTGGCGCAGA AGATCGGCCA TCCGCAGGCC GGCGCCACCA CCGCCTGGGT GCCGTCGCCG
ACCGCCGCGA CGCTGCACGC GCTGCATTAT CACCAGGTCG ACGTCATCGC CCGTCAGCAG
GAACTGCAGA AGGGCGGGCC GCGCGCCAAG CTCGACGACA TCCTCACCAT TCCGGTGTCG
CAATCGAACT GGGCGCCGGA CGACGTCCGC CAGGAGATCG ACAACAACTG CCAGGGCATC
CTCGGCTACG TCGTGCGCTG GATCGACCAG GGCGTCGGCT GCTCCAAGGT GCCGGACATC
CACGATGTCG GCTTGATGGA AGACCGCGCG ACGCTGCGCA TCTCCAGCCA GCATCTGGCG
AACTGGCTGC ATCATGGCGT CGTCACCAAG GAGCAGGTGC TGGAATCGCT GAAGCGGATG
GCCGCCGTCG TCGACAAGCA GAACGCCAGC GATCCGCTGT ACCGGCCGAT GGCGCCGGAT
TTCGACGGCG TCGCCTTCGA GGCCGCCTGC GACCTGATCT TCAAGGGCCG CGAGCAGCCG
AACGGCTACA CCGAATTCAT CCTGCATATC CGTCGCCGCG AAGCCAAGGC CGCGCATCTG
CAGGATCTAC GCTGA
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| Protein sequence | MNRIDAHGLK IAPVLFDFIA KEAAPKTGVA PDAFWAGLAA IVRDLTPKLR KALTTRDDLQ
AKIDAWHLAN KGKKQDLAVY TAFLKEIGYL QPEPATVAVE TANVDEEIGK LCGPQLVVPL
SNARYALNAA NARWGSLYDA FYGTDAIPQE ATQAKGYDKA RGDKVIAKAK AFLDQAAPLV
AGSHSDVTAY SVIAGQFSAK LKSGNATGLK KPEQFAGYLG DAASPSAVLV VNNGLHIEIK
IDRANTIGKD DPAGVADLVI ESAVSTILDM EDSVAAVDAE DKVLIYRNVL GLMDGTLSES
FDKGGKTVTR ALNGDRTYTG PDGKDITLHG RSLLLMRNVG HHMWTDAVLD ADGAEIPEGF
LDAAVSGLIA IHDLKALGKT RNSRSGSVYI VKPKMHGPDE VALTCELFGR VEKMLGLNDN
TLKVGIMDEE RRTTVNLKAC IQNASKRIVF INTGFLDRTG DEIHTSMEAG PMIRKNEMKA
QPWIKAYEDW NVDTGLIDGL PGHAQIGKGM WAAPDKMADM LAQKIGHPQA GATTAWVPSP
TAATLHALHY HQVDVIARQQ ELQKGGPRAK LDDILTIPVS QSNWAPDDVR QEIDNNCQGI
LGYVVRWIDQ GVGCSKVPDI HDVGLMEDRA TLRISSQHLA NWLHHGVVTK EQVLESLKRM
AAVVDKQNAS DPLYRPMAPD FDGVAFEAAC DLIFKGREQP NGYTEFILHI RRREAKAAHL
QDLR
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