Gene RPD_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1371 
Symbol 
ID4021848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1541009 
End bp1541761 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID637961564 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_568510 
Protein GI91975851 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.595615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTT CCGGGATCGC ATCGCGACGA AGTTCGATGG CTCCGTTGGT GGCCTTCGCG 
GCCGCCATTC TGCTGACGGC CGCGCTTCCT GGCGGAGCAT CGGCGCAGAT GCTGGGCTAC
GCGGCCGCGC CACAGGCCGG TCCGTTCGAG GCCGACGACG AGATCATGGC CGCCCCGCCC
CGGACGGCGT CGCCCGACGA AGCCGTCGGC GGCGATGACG CGCAACTCGC TGACCGGCTG
CGGCGGCAGG TCGTCGCCTA TGACGGCAAC CAGCCGGCCG GCACCATCGT GATCGATACC
GCGAACACCT ATCTCTATTA CGTGCTGGGC GGCGGCCGGG CGATCCGCTA CGGCGTCGGC
GTCGGCCGCG AGGGCTTCAC CTGGGCGGGG ACGCAGACCA TCACCCGCAA GGCTGAATGG
CCGGATTGGC ATCCGCCGGC CCAGATGATT GCGCGCCAGC CCTATCTGCC GCGCTTCATG
GCTGGAGGCC CGGGCAATCC GCTCGGCGCG CGGGCGATGT ATCTCGGATC GACCCAGTAT
CGCATCCACG GCACCAACGA TCCCTCGACC ATCGGCAAGT ACGTGTCATC GGGATGCATC
CGGCTCACCA ATGAGGACGT CGCCGACCTG TTCAGCCGCG CCAATATCGG CGCCCGGGTT
GTCGTGCTGC CGAAATCGTC GCCGAACCGC GAGGCCCGCA AGGCCCGGCC CGACCGGCAG
GCGATGATCA TTTCGGTTTC GTCGGTCGAC TAG
 
Protein sequence
MITSGIASRR SSMAPLVAFA AAILLTAALP GGASAQMLGY AAAPQAGPFE ADDEIMAAPP 
RTASPDEAVG GDDAQLADRL RRQVVAYDGN QPAGTIVIDT ANTYLYYVLG GGRAIRYGVG
VGREGFTWAG TQTITRKAEW PDWHPPAQMI ARQPYLPRFM AGGPGNPLGA RAMYLGSTQY
RIHGTNDPST IGKYVSSGCI RLTNEDVADL FSRANIGARV VVLPKSSPNR EARKARPDRQ
AMIISVSSVD