| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1360 |
|---|
| Symbol | |
|---|
| ID | 4021837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1530263 |
|---|
| End bp | 1532374 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961553 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_568499 |
|---|
| Protein GI | 91975840 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGC GCCCAGACAT CGAGATCCGA CATTCGACGT GTCCGCATGA TTGTCCGTCT
GCCTGTGCGC TCGACGTCGA GGTGATCGAC CGTTCGACCA TCGGCCGGGT GCGCGGGTCG
AAGCAGCAAA CCTATACGGC CGGCGTCATC TGCGCCAAGG TTGCGCGCTA CGCCGAGCGC
ATCCATCACC CCGACCGGCT CAAATACCCG ATGCGCCGTT CCGGCCCGAA GGGATCGGGG
CAGTTCGTCA GGATCAGTTG GGACGAGGCG CTCGACGAGA TCGCCGCGCG GTTCAACGCG
GCTGAAGCGG AATTCGGCGC GGAGTCGGTC TGGCCTTATT ACTACGCCGG AACGATGGGA
CTGGTGATGC GCGACGGCAT CAACCGGTTG GCCAACGCCA AGAAGTACTC GCGATTCTAC
GCGACGATCT GCTCCAACGT CGCCTGGGCG GGCTATGCGG CCGGCGTCGG CAAGGTCGCC
GGCGTCGATC CGCGGGAAAT GGCGAAGTCG GATCTGATCG TGATCTGGGG AACCAACGCG
GTCTCGACCC AGGTCAATGT GATGACGCAC GCCTCCCGCG CCCGCAAGGA GCGTGGAGCG
CGGATCGCCG CCGTCGACAT CTACGACAAC GAGACCATGA AGCAGGCCGA TATCCGGATC
ATCCTGCGTC CGGGCACCGA CGGTGCGTTC GCCTGCGGCG TCATGCATGT GCTGTTCCGC
GACGGCTACG CCGACCGAGA CTATCTCGCC CGCTACACCG ATTGCCCCGA TGAGCTGGAG
GCGCATCTGG CGGCGCGCAC GCCGGAATGG GCGTCCGCGA TTTGCGGCGT GCCGGTGGCC
GAAATCGAGG CCTTCGCCCA TGCGATCGGC GAGACCAAAC GTAGTTTCTT CCGGCTCGGC
TATGGCTTCA CGCGTAGCCG CAACGGCGCG GCGCAGATGC ATGCGGCGCT GTGTATCCCG
GCGGTGACCG GCGCCTGGCA GTACGAAGGC GGCGGCGCCT TCTTCAATAA CGGCGCTATC
TTCGGCTTCG ACAAGACGTT GATCGAGGGA CTTGATACGC TTGATCCGTC GACGCGGGTG
CTGGACCAAT CGAAGATCGG CCGCATCCTC ACCGGCGACG CCGAGGCGCT CGGCGGGGGC
GCGCCGGTCA AGGCGATGCT GATCCAGAAC ACCAACCCGA TGACGGTTGC GCCGGAGCAG
ACGCTGGTTC GCGACGGCTT TGCGCGCGAG GATCTGTTCG TCGCGGTGCA CGAGCAGTTC
ATGACCGAAA CCGCGCTGAT GGCCGACATT GTGCTGCCTG CAACGATGTT TCTCGAACAT
GACGATTTGT ACTACGGCGG CGGGCACCAG CACATTTCTG TCGGGGCCAG ACTGATTGAT
CCGCCGGGCG AATGTCGCTC CAACCACGAG GTTCTGCAGG GCCTCGCGAT CAGGCTCGAG
GTCCGGCACC CGGCGTTCGA AATGACGTCG CGCGAAGTGA TCGATGCCAC GCTGAAGAAA
AGCGGCTGGG GCGAAATTGC GGCGCTTGAG GCGGAATTGT GGCGTGACCT GCAGCCCGAT
TTCCGCGCGG CGCACTTTCT CGACGGCTTC GCTCACGCGG ACGGAAAATT CCACTTTCGC
GCCGACTGGG GCGAGGTGAA CGTGCCGCGG CAGATGAAAT TCGGTCCGTG GCAGGCGATG
CCGAGTCTGC CCGACCATTG GGCGGTGACT GAGCATGCCG ACGACGAACA TCGGTTCCGG
CTGGCGACCA GTCCGGCGCG AAGCTTTCTC AATACGACAT TCAATGAGAC GCCGTCGTCA
CGCGCGCGCG AAGGCGCGCC GACGGTTTTG ATACACCCGG CGGATGCCGC AACGATCGGA
GTGGGCGAGG GGGATGCGGT GACGCTCGGA AATCAGCGGG GCGAGACGAC GCTGACTGCG
AAGCTCGACG CCGGGCTACG CCGCGGCGTG CTGATCGCCG TGTCGATCTT CCCGAACAGC
GCACATGCGG GCGGCCGCGG GATCAATGTC TTGACCAGCG CAGACTCGAT CGCGCCGCAC
GGCGGTGCAG CGTTTCACGA CAATAAAGTA TGGGCGAAGA AGGCCTTACC GCCGCTCGCG
AAGCGCGACT GA
|
|---|
| Protein sequence | MNQRPDIEIR HSTCPHDCPS ACALDVEVID RSTIGRVRGS KQQTYTAGVI CAKVARYAER
IHHPDRLKYP MRRSGPKGSG QFVRISWDEA LDEIAARFNA AEAEFGAESV WPYYYAGTMG
LVMRDGINRL ANAKKYSRFY ATICSNVAWA GYAAGVGKVA GVDPREMAKS DLIVIWGTNA
VSTQVNVMTH ASRARKERGA RIAAVDIYDN ETMKQADIRI ILRPGTDGAF ACGVMHVLFR
DGYADRDYLA RYTDCPDELE AHLAARTPEW ASAICGVPVA EIEAFAHAIG ETKRSFFRLG
YGFTRSRNGA AQMHAALCIP AVTGAWQYEG GGAFFNNGAI FGFDKTLIEG LDTLDPSTRV
LDQSKIGRIL TGDAEALGGG APVKAMLIQN TNPMTVAPEQ TLVRDGFARE DLFVAVHEQF
MTETALMADI VLPATMFLEH DDLYYGGGHQ HISVGARLID PPGECRSNHE VLQGLAIRLE
VRHPAFEMTS REVIDATLKK SGWGEIAALE AELWRDLQPD FRAAHFLDGF AHADGKFHFR
ADWGEVNVPR QMKFGPWQAM PSLPDHWAVT EHADDEHRFR LATSPARSFL NTTFNETPSS
RAREGAPTVL IHPADAATIG VGEGDAVTLG NQRGETTLTA KLDAGLRRGV LIAVSIFPNS
AHAGGRGINV LTSADSIAPH GGAAFHDNKV WAKKALPPLA KRD
|
|---|
| |