| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1348 |
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| Symbol | |
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| ID | 4021825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1516634 |
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| End bp | 1518394 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961541 |
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| Product | Poly-beta-hydroxybutyrate polymerase-like |
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| Protein accession | YP_568487 |
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| Protein GI | 91975828 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAA CGCCGTCGAA CCCAATTGCC GTAGCGCCGC AAGCGCCGGT CAGGCATGTC
GGGTCGACCG ACAGCGACCG CTCGCTGCAC GCCGCGCTGG CGCCGCTGAC CGGCGGGCTG
TCGCCGACCG CACTGTCGCT CGCTTATGCC GACTGGCTCT CGCATCTGTT TTGGGCGCCG
GCGCGCCGGC TCGACCTCGC GCAGGATGCG CTGCGCGGCG CCGCGCAATT GGCGCAAGCC
GCTGTCCATC CCGCGCCTCC GTGGTCGCTG ATCACGCCGC AGCCGCAGGA TCGACGCTTT
GCCGGGCCGG AATGGCGGCA GCCGCCATTC AACCTGATGG CGCAGAGTTT TCTGCTCGCC
GAGGAGTGGT GGCGCGACGC CACCACCGGG ATCCGCGGCG TGTCCCAGCA GAACGCGAAG
ATCGTCGAAT TCGCCATGCG GCAGATGCTC GACGTGTTTG CGCCGTCGAA CTTCGCGCTC
ACGAATCCCG AGGTGATCCG CCGCACTCTC ACGTCCGAAG GCGGCAACGT CACCGCAGGC
CTGCGGAATT GGTGGGAGGA TCTGCTGCAG ACGATGTCGC ACGACACCGA CCTGAAGCAC
GATTTCGAGG TCGGGCGCGA CGTCGCGGTG ACGCCGGGCA AGGTGGTCTA CAGCAACGAT
CTGATCGAGC TGATCCAATA TGCGCCCGCA ACGGGGGAGG TTCGGCCGGA GCCGATCCTG
ATCGTGCCGG CCTGGATCAT GAAGTACTAC ATTCTCGATT TGTCGCCGCA CAACTCATTG
GTGAAGTACC TCACCGAACA GGGCTTCACC GTCTTCATGG TCTCGTGGCG CAATCCGACG
GCGAAACACC GGGATCTCAC GCTGGAGGAC TATCGCCGGC TCGGCGTGAT GGCTGCGATC
GAGACCATCC GTGCGATCGT CCCGCACCAG CCGATCCACG CGGTCGGCTA TTGCCTCGGC
GGCACATTGC TGTCGATCGC GGCGGCGGCG ATGTCGCGCG ATGGCGACGA TCGGCTGCGA
TCGATCACGC TGTTCGCGGC CCAGACCGAC TTCACCGAAG CCGGCGAGTT AACTCTGTTC
ATCAATGAAA GCCAGGTGGC TTTTCTCGAG GACATGATGT GGAAGCGCGG GGTGCTCGAC
ACCACGCAGA TGGCCGGCGC TTTCCAGATC TTACGCTCCA ACGATCTGGT CTGGTCGCGG
ATGGTGCGCG ACTATCTGAT GGGAGAGCGG TCCGAGCCGA ACGATCTGAT GGCGTGGAAC
GCCGACGCCA CCCGGATGCC GTATCGGATG CATTCCGAAT ATCTGCGCAA GCTGTTCCTC
GACAACGACC TTGCCGAGGG GCGCTACACC GTCGACGACA GGGCGATCGC GCTGTCGGAC
ATTCACACTC CGATGTTCGT GGTCGGCACG CTGCGCGACC ACGTGGCGCC GTGGCGCTCC
ACCTTCAAGA TCCATCTGCT GGCCGACGCC GAGATCACCT TCTGCCTGAC CGGCGGCGGC
CACAATGCCG GCATCGTCTC GCCGCCGTCG CCGAAAGCGC ACGGCTATCA GGTGATGATG
AAGGAGGCTG ATGGTCCCTA TATCGGCCCG GACGATTGGA TCAAGGAGGC GCCGCACGCC
GAAGGATCGT GGTGGACCGA ATGGGTGCAC TGGCTCGAGG CACGATCTGG CCAGCCGGTG
CCGCCGCCGC GGATCGGGCT TCCGGATACG AACGCCGCCG AGCTGCCGGA TGCCCCCGGC
CATTACGTGC TGCAGGCCTG A
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| Protein sequence | MLQTPSNPIA VAPQAPVRHV GSTDSDRSLH AALAPLTGGL SPTALSLAYA DWLSHLFWAP
ARRLDLAQDA LRGAAQLAQA AVHPAPPWSL ITPQPQDRRF AGPEWRQPPF NLMAQSFLLA
EEWWRDATTG IRGVSQQNAK IVEFAMRQML DVFAPSNFAL TNPEVIRRTL TSEGGNVTAG
LRNWWEDLLQ TMSHDTDLKH DFEVGRDVAV TPGKVVYSND LIELIQYAPA TGEVRPEPIL
IVPAWIMKYY ILDLSPHNSL VKYLTEQGFT VFMVSWRNPT AKHRDLTLED YRRLGVMAAI
ETIRAIVPHQ PIHAVGYCLG GTLLSIAAAA MSRDGDDRLR SITLFAAQTD FTEAGELTLF
INESQVAFLE DMMWKRGVLD TTQMAGAFQI LRSNDLVWSR MVRDYLMGER SEPNDLMAWN
ADATRMPYRM HSEYLRKLFL DNDLAEGRYT VDDRAIALSD IHTPMFVVGT LRDHVAPWRS
TFKIHLLADA EITFCLTGGG HNAGIVSPPS PKAHGYQVMM KEADGPYIGP DDWIKEAPHA
EGSWWTEWVH WLEARSGQPV PPPRIGLPDT NAAELPDAPG HYVLQA
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