Gene RPD_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1346 
Symbol 
ID4021823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1515153 
End bp1515977 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID637961539 
Producthypothetical protein 
Protein accessionYP_568485 
Protein GI91975826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.658073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATT CGACGATGAT GGTGACCTTG TCGTGCGATC ATACGAATGC GTGTCAGCTC 
GGGATCGCCG CTGAACTCGC AGAACGGTTC GAAGCCCGGG TGATCGGCAT CGCGGCCTCT
GACATCAGTC CGCCACTCTA CTTTACCTCC GGAGATCAGG CCGAGCGGCT GCTCGAGCAC
GGACTCGCTG CGATCCGGCA GCGCCTTGGC GAAGTGGAAG CCGAATTCCG GCAGGCGATG
GGCGGCCATG CGCGGGAGCT GCAATGGCGC TCGGCGATCG ACCAGCCGGC CAAGTACATC
GTGCAGCAGG CGCGCGCTGC GGACATCGTG ATCAGCCGCG CCGCCGGGCC GCTGACCGAC
CCGTTTGCAT TGGCCGATCC GGCGGATCTG GTGATGCAGA TCGGACGGCC GTTGCTGGTT
GTCCCCGACG ATAATTGTCG CGTCGATCTG TCGAGCGTGC TGGTGGCGTG GAAGGACAAT
CCGGAGGCCC GCCGCGCGAT CGTCAATGCG CTGCCGCTTC TGCGTCAAGC AAGCCACGTC
ACAGTGGTGG AGATCGTCGA ACATGACGGC AGCCGCGCCG ACGCGCTTGC CGGCGTTCAC
GATGTAGTCG ACTGGCTGTC GCGCCATCAT ATCCACGCCA CAGGCGAGGT GCCGGCGCCG
GCCGGCGATG TCGCCAGGCA ACTCGATACG GTCGCAACCC AGGTCCGCGC CGGAATTGTC
GTCGCCGGCG CCTATGGGCA CTCGCGATTC CGCGAATGGA TCCTTGGCGG CGTCACCCAG
CACCTGATCG AGCAGACCGC CCGCTGCGCC TTGCTGGCGC GCTGA
 
Protein sequence
MTYSTMMVTL SCDHTNACQL GIAAELAERF EARVIGIAAS DISPPLYFTS GDQAERLLEH 
GLAAIRQRLG EVEAEFRQAM GGHARELQWR SAIDQPAKYI VQQARAADIV ISRAAGPLTD
PFALADPADL VMQIGRPLLV VPDDNCRVDL SSVLVAWKDN PEARRAIVNA LPLLRQASHV
TVVEIVEHDG SRADALAGVH DVVDWLSRHH IHATGEVPAP AGDVARQLDT VATQVRAGIV
VAGAYGHSRF REWILGGVTQ HLIEQTARCA LLAR