Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1346 |
Symbol | |
ID | 4021823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1515153 |
End bp | 1515977 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961539 |
Product | hypothetical protein |
Protein accession | YP_568485 |
Protein GI | 91975826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.658073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATT CGACGATGAT GGTGACCTTG TCGTGCGATC ATACGAATGC GTGTCAGCTC GGGATCGCCG CTGAACTCGC AGAACGGTTC GAAGCCCGGG TGATCGGCAT CGCGGCCTCT GACATCAGTC CGCCACTCTA CTTTACCTCC GGAGATCAGG CCGAGCGGCT GCTCGAGCAC GGACTCGCTG CGATCCGGCA GCGCCTTGGC GAAGTGGAAG CCGAATTCCG GCAGGCGATG GGCGGCCATG CGCGGGAGCT GCAATGGCGC TCGGCGATCG ACCAGCCGGC CAAGTACATC GTGCAGCAGG CGCGCGCTGC GGACATCGTG ATCAGCCGCG CCGCCGGGCC GCTGACCGAC CCGTTTGCAT TGGCCGATCC GGCGGATCTG GTGATGCAGA TCGGACGGCC GTTGCTGGTT GTCCCCGACG ATAATTGTCG CGTCGATCTG TCGAGCGTGC TGGTGGCGTG GAAGGACAAT CCGGAGGCCC GCCGCGCGAT CGTCAATGCG CTGCCGCTTC TGCGTCAAGC AAGCCACGTC ACAGTGGTGG AGATCGTCGA ACATGACGGC AGCCGCGCCG ACGCGCTTGC CGGCGTTCAC GATGTAGTCG ACTGGCTGTC GCGCCATCAT ATCCACGCCA CAGGCGAGGT GCCGGCGCCG GCCGGCGATG TCGCCAGGCA ACTCGATACG GTCGCAACCC AGGTCCGCGC CGGAATTGTC GTCGCCGGCG CCTATGGGCA CTCGCGATTC CGCGAATGGA TCCTTGGCGG CGTCACCCAG CACCTGATCG AGCAGACCGC CCGCTGCGCC TTGCTGGCGC GCTGA
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Protein sequence | MTYSTMMVTL SCDHTNACQL GIAAELAERF EARVIGIAAS DISPPLYFTS GDQAERLLEH GLAAIRQRLG EVEAEFRQAM GGHARELQWR SAIDQPAKYI VQQARAADIV ISRAAGPLTD PFALADPADL VMQIGRPLLV VPDDNCRVDL SSVLVAWKDN PEARRAIVNA LPLLRQASHV TVVEIVEHDG SRADALAGVH DVVDWLSRHH IHATGEVPAP AGDVARQLDT VATQVRAGIV VAGAYGHSRF REWILGGVTQ HLIEQTARCA LLAR
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