Gene RPD_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1344 
Symbol 
ID4021821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1513313 
End bp1514044 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID637961537 
Productputative signal-transduction protein with CBS domains 
Protein accessionYP_568483 
Protein GI91975824 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGC AGCAGATCAT GACGGAACAG GTGATGACGA TCGGGCCCGA AGCCTCGATT 
ATCGACGCCG CCAATGTAAT GCTCGAAAAC CACGTCAGCG GCCTGCCGGT GGTCGACGCC
GACGGCAAAC TGGTCGGCAT CATCTCGGAA GGCGACTTCA TCCGCCGCGC TGAGCTCGGC
ACCCAGCGCA AACGCAGCCG CTGGCTGCGG CTGCTGCTCG GCCCAGGAAC CTGCGCTGCC
GACTTCGTCC ACGAGCACGG CCGCAAGGTC GGCGAGGTGA TGACCCATCA TCCGCATACG
ATCACGGAAG ACACGCCGAT CGAGGCCATC GTCAAGACGA TGGAGAAGCA TCACGTCAAG
CGCCTGCCGG TGATGCGCGG CGACCTGCTG GTCGGCATCG TCACCCGCAA GAACTTGCTG
CGCGCGGTCG CCAACCTGGC GCGCGAAGTT CCGGACCCGA GCGCGGCCGA CGACAAGATC
CGCGAGAAGA TCGTCGCCGA AATCGAACGC AACGACTGGC GACCGTTCGG GCTCAGCGTG
CTGGTGCGCG AAGGCGTCGT GCACCTTAGC GGCGTGATCA CCGAGGAGCG CTCGCGCCAG
GCGGCGATCG TCGCCGCGGA GAATGTATGC GGGGTCAGGG AGGTGCACGA TCACCTTTGC
TGGGTCGACA CCATGTCCGG CTTCTACTTG AATTCGCCGG AGGACGATCG CTCCGCCAAG
AAGCAGCGCT GA
 
Protein sequence
MRAQQIMTEQ VMTIGPEASI IDAANVMLEN HVSGLPVVDA DGKLVGIISE GDFIRRAELG 
TQRKRSRWLR LLLGPGTCAA DFVHEHGRKV GEVMTHHPHT ITEDTPIEAI VKTMEKHHVK
RLPVMRGDLL VGIVTRKNLL RAVANLAREV PDPSAADDKI REKIVAEIER NDWRPFGLSV
LVREGVVHLS GVITEERSRQ AAIVAAENVC GVREVHDHLC WVDTMSGFYL NSPEDDRSAK
KQR