| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1337 |
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| Symbol | |
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| ID | 4021814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1505148 |
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| End bp | 1506593 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961530 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_568476 |
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| Protein GI | 91975817 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.210293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGA TTGCGCTCAT TCTGCTACCG GCCATTGGCG GCCTCGTCGC ATTCTTCATC
GCGGGACGCG GCGAGCGCGA ACGATGGGTC ACGATCGCGA CCTTTGCGTT GATGCTCGTG
CTGCTCGCCG CGATCGTCGC CGGCGCCGAC GAGGGCCGTT GGTACGCGAA AGTCTCCTAT
CCATGGGTGC CGTCGTTCGG CATTTCGCTC GACTTCGCGA TGGACGGGCT GTCGGCGGCC
CTGATCGCCA TCGCAGCCGG ACTCGGCATC ATTTCGGTGA TGGCGTCGTG GTCGGAGATC
CGCACCCAGT CCGGGCTGTT TCACGCCAGC CTGTGCTGGA CCGTGGCTGC GACGATCGGC
GTGTTCCTGT CGTTCGACCT CTTGATCTTC GCGTTCTTCT GGGAGGCGAT GCTGGTGCCG
GCGTTCACAC TGATCGCGGT GTGGGGCCAT GGCGACCGCG AAGGCGCAGC GCTGAAATTC
CTGATCTTCA ACGCGGTCGC GGGATTTGGA CTGCTGGCGG CGTCGTTCGC GCTGGCGTCG
ATGGCCGACC ACATGACCTT CAACGCGTTC GAACTCGCGG AGATGAAGCT CAGCACGTCG
GTGCAGGTCT GGATGCTGCT CGGCTTTTCG CTCGCCTTCC TGGTCAAGCT GTCGGTGCCA
CCGTTCCACG CCTGGCTGCC TGAGGCTCAT ACGCTGGCCC CGACCGCAGG CTCGATCCTG
CTTGCGGGCG TGCTGCTGAA GACCGGCGCC TACGGCCTGT TCCGGTTCGC GCCGATGCTG
TTTCCGCAAG GCCTGGAGGC TGTCGCGCCC TACGGCATCG CGCTCGGCGC GGCCGGCGCG
CTGTACGGCG GCTTCGTCGC CTGCGGCCAG AACGACGCCA AGCGGCTGGT CGCCTACACG
TCGATCGCGC ATATGTCGAT CGTGCTGATG GGCATCTCAG CCGGCGTGCA GTATGCGCTG
GCCGGCGCTG CGGTCGAGAT GATCGCGCAT TCGTTCTCGG CCTCGGCTCT GTTTTTGCTG
ATCGGCGCGC TCTACGAGCG CACCCACACG CGCGATCTGC GCCAGCTCGG CGGTCTGCAA
CAGCTCGCGC CGCGTTTCGC TGCGGCTTTC GCGCTGTTCT GCTCTGCGCT GCTGGCGCTG
CCCGGCACCG CGAACTTTGT CGGCGAGGCG CTGATCGTGG TGGGCATCTT CCAGGTCAAC
TGGGTGTTCG CGCTGCTGGC GCTGTCAACG CTGGTGGTCT CGGTGATCTA CGCGACGCGG
CTGCTGAAGG GGCTGGTGTT CGGCGTGCCG CGGACCAATG CGCCGCTCGC CGATCTCAAC
TGGCGTGAAT ATTGGCCGGT GCTGGTGATG AGCCTCGCCA CCCTGATCAT CGGGCTCTAC
CCGCAGGGCC TGCTGGCGCT GCTCGAACCG GCCATCAAGG CCGCACTGGT GCTGCCTCGG
CCATGA
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| Protein sequence | MALIALILLP AIGGLVAFFI AGRGERERWV TIATFALMLV LLAAIVAGAD EGRWYAKVSY
PWVPSFGISL DFAMDGLSAA LIAIAAGLGI ISVMASWSEI RTQSGLFHAS LCWTVAATIG
VFLSFDLLIF AFFWEAMLVP AFTLIAVWGH GDREGAALKF LIFNAVAGFG LLAASFALAS
MADHMTFNAF ELAEMKLSTS VQVWMLLGFS LAFLVKLSVP PFHAWLPEAH TLAPTAGSIL
LAGVLLKTGA YGLFRFAPML FPQGLEAVAP YGIALGAAGA LYGGFVACGQ NDAKRLVAYT
SIAHMSIVLM GISAGVQYAL AGAAVEMIAH SFSASALFLL IGALYERTHT RDLRQLGGLQ
QLAPRFAAAF ALFCSALLAL PGTANFVGEA LIVVGIFQVN WVFALLALST LVVSVIYATR
LLKGLVFGVP RTNAPLADLN WREYWPVLVM SLATLIIGLY PQGLLALLEP AIKAALVLPR
P
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